Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.31□□□□□ -1.88
KLHL41O60662 AL731537.2-201ENST00000561565 951 ntBASIC3.31□□□□□ -1.88
KLHL41O60662 MIR3922-201ENST00000585192 84 ntBASIC3.31□□□□□ -1.88
KLHL41O60662 AC055876.5-201ENST00000605667 259 ntBASIC3.31□□□□□ -1.88
KLHL41O60662 AL442067.2-201ENST00000614033 363 ntBASIC3.31□□□□□ -1.88
KLHL41O60662 AC098679.5-201ENST00000624394 571 ntBASIC3.31□□□□□ -1.88
KLHL41O60662 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
KLHL41O60662 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
KLHL41O60662 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL41O60662 AC111188.2-201ENST00000529697 1387 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL41O60662 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KLHL41O60662 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL41O60662 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL41O60662 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 UBE2V1P15-201ENST00000407776 448 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 RPS15AP38-201ENST00000413110 372 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL41O60662 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL41O60662 RPF2P1-201ENST00000424137 906 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 AL009174.1-201ENST00000426577 416 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 AL035410.1-201ENST00000427409 427 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL41O60662 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL41O60662 RPS26P30-201ENST00000443431 335 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL41O60662 AL929288.2-201ENST00000446368 407 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 AC015908.1-201ENST00000478739 476 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.3□□□□□ -1.88
KLHL41O60662 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.3□□□□□ -1.88
KLHL41O60662 AP000790.1-201ENST00000528891 737 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.3□□□□□ -1.88
KLHL41O60662 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.3□□□□□ -1.88
KLHL41O60662 BPTFP1-201ENST00000579209 492 ntBASIC3.3□□□□□ -1.88
KLHL41O60662 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.3□□□□□ -1.88
KLHL41O60662 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KLHL41O60662 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
KLHL41O60662 RSL24D1P1-201ENST00000404972 493 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 U3.42-201ENST00000408746 214 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL41O60662 TMEM167AP1-201ENST00000423409 219 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC006028.1-201ENST00000438379 402 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC127537.2-201ENST00000439258 465 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL41O60662 AL645638.1-201ENST00000440519 361 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC002542.1-201ENST00000440683 193 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 snoU109.4-201ENST00000458953 143 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 RPS29P12-201ENST00000460178 152 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL41O60662 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL41O60662 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.29□□□□□ -1.88
KLHL41O60662 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL41O60662 AC110794.1-201ENST00000505816 425 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 MTND3P24-201ENST00000506306 329 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL41O60662 PRELID3BP4-201ENST00000515476 571 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL41O60662 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL41O60662 ZNF705CP-201ENST00000530515 889 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL41O60662 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL41O60662 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.29□□□□□ -1.88
KLHL41O60662 AC090666.1-201ENST00000578241 445 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 FAM60BP-201ENST00000578364 658 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.29□□□□□ -1.88
KLHL41O60662 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL41O60662 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL41O60662 AL163051.2-201ENST00000618976 735 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
KLHL41O60662 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL41O60662 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL41O60662 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
KLHL41O60662 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
KLHL41O60662 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KLHL41O60662 AC011460.1-201ENST00000636268 1834 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KLHL41O60662 AC099654.7-201ENST00000635788 2127 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.28□□□□□ -1.88
KLHL41O60662 AL589826.1-201ENST00000340697 249 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 RNU6-173P-201ENST00000364215 104 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 OR6K3-202ENST00000368146 996 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KLHL41O60662 RNU6-796P-201ENST00000391086 107 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 TMSB4XP8-201ENST00000402089 135 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 MIR1289-1-201ENST00000408836 144 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 RNA5SP120-201ENST00000410900 112 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 AL133384.1-201ENST00000412744 351 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 TMSB4XP6-201ENST00000415187 135 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 AC006960.1-201ENST00000419980 153 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 AC009237.2-201ENST00000421358 284 ntBASIC3.28□□□□□ -1.88
KLHL41O60662 TMSB4XP1-201ENST00000424567 135 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms