Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL445567.1-201ENST00000439121 144 ntBASIC3.64□□□□□ -1.83
SSX4O60224 SDCBPP1-201ENST00000440192 890 ntBASIC3.64□□□□□ -1.83
SSX4O60224 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 Z95327.1-201ENST00000446082 482 ntBASIC3.64□□□□□ -1.83
SSX4O60224 MTCO1P27-201ENST00000448269 226 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AL162151.2-201ENST00000448875 158 ntBASIC3.64□□□□□ -1.83
SSX4O60224 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.64□□□□□ -1.83
SSX4O60224 HMGB1P15-201ENST00000453854 435 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AP000873.1-201ENST00000463987 400 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RN7SL132P-201ENST00000478131 296 ntBASIC3.64□□□□□ -1.83
SSX4O60224 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 RPL5P23-201ENST00000496040 868 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RPS27AP13-201ENST00000498403 237 ntBASIC3.64□□□□□ -1.83
SSX4O60224 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 RPF2P2-201ENST00000504693 896 ntBASIC3.64□□□□□ -1.83
SSX4O60224 COX7A2P2-201ENST00000505291 250 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AC024589.1-201ENST00000512207 263 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.64□□□□□ -1.83
SSX4O60224 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.64□□□□□ -1.83
SSX4O60224 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.64□□□□□ -1.83
SSX4O60224 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 AC135628.1-201ENST00000568867 534 ntBASIC3.64□□□□□ -1.83
SSX4O60224 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.64□□□□□ -1.83
SSX4O60224 MIR4286-201ENST00000580651 93 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.64□□□□□ -1.83
SSX4O60224 AC244505.7-201ENST00000599675 272 ntBASIC3.64□□□□□ -1.83
SSX4O60224 SNRPGP15-201ENST00000600149 222 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AL354984.3-201ENST00000604803 325 ntBASIC3.64□□□□□ -1.83
SSX4O60224 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AC122133.1-201ENST00000613964 233 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AL021997.2-201ENST00000615674 271 ntBASIC3.64□□□□□ -1.83
SSX4O60224 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AC068057.2-201ENST00000624047 895 ntBASIC3.64□□□□□ -1.83
SSX4O60224 AC009039.2-201ENST00000624524 529 ntBASIC3.64□□□□□ -1.83
SSX4O60224 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SSX4O60224 AC099063.3-201ENST00000642066 185 ntBASIC3.64□□□□□ -1.83
SSX4O60224 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSX4O60224 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.64□□□□□ -1.83
SSX4O60224 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX4O60224 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SSX4O60224 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 RNU1-14P-201ENST00000362759 152 ntBASIC3.63□□□□□ -1.83
SSX4O60224 RNU6-553P-201ENST00000364047 96 ntBASIC3.63□□□□□ -1.83
SSX4O60224 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX4O60224 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSX4O60224 RNU6-629P-201ENST00000384061 103 ntBASIC3.63□□□□□ -1.83
SSX4O60224 MIR554-201ENST00000384874 96 ntBASIC3.63□□□□□ -1.83
SSX4O60224 MIR320C1-201ENST00000408566 88 ntBASIC3.63□□□□□ -1.83
SSX4O60224 RN7SKP235-201ENST00000410662 305 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC245052.5-201ENST00000416320 649 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX4O60224 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX4O60224 EIF1P3-201ENST00000423841 334 ntBASIC3.63□□□□□ -1.83
SSX4O60224 BTF3P10-201ENST00000433415 495 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX4O60224 AL590103.1-201ENST00000434488 307 ntBASIC3.63□□□□□ -1.83
SSX4O60224 UBE2FP3-201ENST00000436366 524 ntBASIC3.63□□□□□ -1.83
SSX4O60224 MTCYBP39-201ENST00000437562 491 ntBASIC3.63□□□□□ -1.83
SSX4O60224 RPL7P52-201ENST00000449200 742 ntBASIC3.63□□□□□ -1.83
SSX4O60224 PAXBP1P1-201ENST00000449315 447 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX4O60224 BET1P1-201ENST00000482276 359 ntBASIC3.63□□□□□ -1.83
SSX4O60224 HMGB1P36-201ENST00000487709 576 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
SSX4O60224 RN7SL691P-201ENST00000494487 301 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC093809.1-201ENST00000509155 340 ntBASIC3.63□□□□□ -1.83
SSX4O60224 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX4O60224 SAP18P1-201ENST00000512058 390 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC093677.1-201ENST00000514414 678 ntBASIC3.63□□□□□ -1.83
SSX4O60224 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX4O60224 MTCO1P49-201ENST00000523429 802 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC087276.1-201ENST00000529659 480 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX4O60224 AC105233.3-201ENST00000531125 744 ntBASIC3.63□□□□□ -1.83
SSX4O60224 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX4O60224 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.63□□□□□ -1.83
SSX4O60224 AC007954.1-201ENST00000554198 494 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.63□□□□□ -1.83
SSX4O60224 AC012435.1-202ENST00000568772 240 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX4O60224 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.63□□□□□ -1.83
SSX4O60224 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.63□□□□□ -1.83
SSX4O60224 AL109653.1-201ENST00000603091 248 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AL161729.3-201ENST00000603533 673 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AL034351.1-201ENST00000605288 668 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC055876.5-201ENST00000605667 259 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC090186.1-201ENST00000605991 572 ntBASIC3.63□□□□□ -1.83
SSX4O60224 AC011816.2-201ENST00000607089 556 ntBASIC3.63□□□□□ -1.83
SSX4O60224 RNU4-89P-201ENST00000607443 133 ntBASIC3.63□□□□□ -1.83
SSX4O60224 MIR6867-201ENST00000610636 67 ntBASIC3.63□□□□□ -1.83
SSX4O60224 MIR6875-201ENST00000617506 72 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms