Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 ACTR3P2-201ENST00000439585 1257 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 MTCO1P27-201ENST00000448269 226 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AC109327.1-201ENST00000471666 403 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AC083829.1-201ENST00000503756 657 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 MTND5P5-201ENST00000503764 376 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC006390.1-201ENST00000508068 283 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 Y_RNA.672-201ENST00000516289 104 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 IGKV2-36-201ENST00000519999 223 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SRGAP3O43295 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AC090502.2-201ENST00000549267 280 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AP001429.1-201ENST00000602568 530 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC090948.2-201ENST00000607363 564 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC093788.1-201ENST00000609356 927 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.37□□□□□ -1.55
SRGAP3O43295 MIR6810-201ENST00000622701 70 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SRGAP3O43295 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SRGAP3O43295 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
SRGAP3O43295 Z95327.2-201ENST00000414579 1873 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SRGAP3O43295 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SRGAP3O43295 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SRGAP3O43295 SNORA62-201ENST00000365493 153 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 SNORD66.1-201ENST00000391230 76 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AL132765.1-201ENST00000434165 553 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 RPS23P7-201ENST00000466210 444 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SRGAP3O43295 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 RNA5SP49-201ENST00000516450 115 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AC023575.1-201ENST00000580510 358 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 CKS1BP3-201ENST00000600888 237 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 AL162413.1-201ENST00000603198 110 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 YWHAQP7-201ENST00000603536 658 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AL161734.1-201ENST00000609720 557 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SRGAP3O43295 AL138721.1-201ENST00000616756 179 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 AC241377.1-201ENST00000619797 406 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 AC019278.1-201ENST00000623516 479 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SRGAP3O43295 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.36□□□□□ -1.55
SRGAP3O43295 AC025125.1-201ENST00000624743 1922 ntBASIC5.36□□□□□ -1.55
SRGAP3O43295 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SRGAP3O43295 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.36□□□□□ -1.55
SRGAP3O43295 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SRGAP3O43295 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
SRGAP3O43295 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.35□□□□□ -1.55
SRGAP3O43295 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SRGAP3O43295 OR11H5P-202ENST00000641612 1325 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 RNA5SP366-201ENST00000365454 123 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 RNU6-878P-201ENST00000384578 110 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AL590004.1-201ENST00000405321 300 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.35□□□□□ -1.55
SRGAP3O43295 RNA5SP36-201ENST00000410197 133 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 RN7SKP235-201ENST00000410662 305 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 RPL23AP26-201ENST00000412728 464 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 CYCSP10-201ENST00000417973 294 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 BTF3L4P3-201ENST00000418879 476 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.35□□□□□ -1.55
SRGAP3O43295 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.35□□□□□ -1.55
SRGAP3O43295 AC133104.1-201ENST00000429100 218 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 DYNLL1P7-201ENST00000429273 258 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC022022.1-201ENST00000430304 178 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC023347.2-201ENST00000433994 462 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 HMGB3P12-201ENST00000438745 556 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.35□□□□□ -1.55
SRGAP3O43295 CALM1P1-201ENST00000442082 433 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 MTND1P18-201ENST00000448191 573 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.35□□□□□ -1.55
SRGAP3O43295 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.35□□□□□ -1.55
SRGAP3O43295 MTND1P12-201ENST00000455231 147 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 RPL7AP52-201ENST00000458096 790 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.35□□□□□ -1.55
SRGAP3O43295 FAM172BP-201ENST00000487497 1089 ntBASIC5.35□□□□□ -1.55
SRGAP3O43295 AC091167.1-201ENST00000492017 396 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms