Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 HIGD1AP17-201ENST00000554576 276 ntBASIC3.25□□□□□ -1.89
PHF1O43189 SERPINE4P-201ENST00000554978 281 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AC008015.1-201ENST00000555505 465 ntBASIC3.25□□□□□ -1.89
PHF1O43189 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.25□□□□□ -1.89
PHF1O43189 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.25□□□□□ -1.89
PHF1O43189 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.25□□□□□ -1.89
PHF1O43189 VN1R90P-201ENST00000595717 726 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AL158042.1-201ENST00000605338 460 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AC091946.2-201ENST00000606105 291 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AC072039.2-201ENST00000608883 439 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AC131235.4-201ENST00000609288 620 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AC005332.6-201ENST00000613178 446 ntBASIC3.25□□□□□ -1.89
PHF1O43189 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHF1O43189 AL603755.1-201ENST00000619504 163 ntBASIC3.25□□□□□ -1.89
PHF1O43189 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHF1O43189 AC079248.2-201ENST00000623779 326 ntBASIC3.25□□□□□ -1.89
PHF1O43189 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.25□□□□□ -1.89
PHF1O43189 AC107081.3-201ENST00000612715 2034 ntBASIC3.25□□□□□ -1.89
PHF1O43189 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.25□□□□□ -1.89
PHF1O43189 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.25□□□□□ -1.89
PHF1O43189 AP000526.1-201ENST00000603308 1388 ntBASIC3.25□□□□□ -1.89
PHF1O43189 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 CR381670.1-201ENST00000624291 1693 ntBASIC3.24□□□□□ -1.89
PHF1O43189 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 AC016716.1-201ENST00000265882 708 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RNA5SP391-201ENST00000363456 119 ntBASIC3.24□□□□□ -1.89
PHF1O43189 Y_RNA.311-201ENST00000365068 96 ntBASIC3.24□□□□□ -1.89
PHF1O43189 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
PHF1O43189 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 RPL23AP47-201ENST00000408017 460 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RHEBP3-201ENST00000411920 351 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AL136133.1-201ENST00000413694 376 ntBASIC3.24□□□□□ -1.89
PHF1O43189 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 AC009518.2-201ENST00000418056 731 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AL365203.2-201ENST00000423444 196 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AL390023.1-201ENST00000428836 262 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RPL31P54-201ENST00000429803 370 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AL513175.1-201ENST00000431492 780 ntBASIC3.24□□□□□ -1.89
PHF1O43189 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 RPS17P13-201ENST00000448974 407 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC098824.1-201ENST00000453565 980 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AL109741.2-201ENST00000455561 343 ntBASIC3.24□□□□□ -1.89
PHF1O43189 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AC146507.1-201ENST00000468335 354 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RPL7P38-201ENST00000488396 739 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC078918.1-201ENST00000498515 228 ntBASIC3.24□□□□□ -1.89
PHF1O43189 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 AC104619.4-201ENST00000510773 249 ntBASIC3.24□□□□□ -1.89
PHF1O43189 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PHF1O43189 AC118465.1-201ENST00000513820 1271 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RNU2-58P-201ENST00000516403 183 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RN7SKP83-201ENST00000516512 178 ntBASIC3.24□□□□□ -1.89
PHF1O43189 SNORA48.10-201ENST00000516965 160 ntBASIC3.24□□□□□ -1.89
PHF1O43189 RNU4-60P-201ENST00000517239 135 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AP001189.2-201ENST00000527320 189 ntBASIC3.24□□□□□ -1.89
PHF1O43189 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.24□□□□□ -1.89
PHF1O43189 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 OR4A12P-201ENST00000530847 918 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 AC090888.1-201ENST00000561335 1141 ntBASIC3.24□□□□□ -1.89
PHF1O43189 EIF5A2P1-201ENST00000564027 460 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.24□□□□□ -1.89
PHF1O43189 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.24□□□□□ -1.89
PHF1O43189 AC022069.1-201ENST00000582910 658 ntBASIC3.24□□□□□ -1.89
PHF1O43189 MIR4999-201ENST00000585029 91 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.24□□□□□ -1.89
PHF1O43189 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AL031281.1-201ENST00000604049 488 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC069304.2-201ENST00000605154 435 ntBASIC3.24□□□□□ -1.89
PHF1O43189 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 AP000676.3-201ENST00000623299 569 ntBASIC3.24□□□□□ -1.89
PHF1O43189 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.24□□□□□ -1.89
PHF1O43189 AC116618.1-201ENST00000634617 774 ntBASIC3.24□□□□□ -1.89
PHF1O43189 MIR3974-201ENST00000637126 96 ntBASIC3.24□□□□□ -1.89
PHF1O43189 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.24□□□□□ -1.89
PHF1O43189 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.24□□□□□ -1.89
PHF1O43189 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHF1O43189 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
PHF1O43189 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.23□□□□□ -1.89
PHF1O43189 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms