Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.39□□□□□ -1.71
PHGDHO43175 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.39□□□□□ -1.71
PHGDHO43175 RPL23AP97-201ENST00000568955 471 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.39□□□□□ -1.71
PHGDHO43175 NRBF2P1-201ENST00000587407 859 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.39□□□□□ -1.71
PHGDHO43175 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC012669.1-201ENST00000603209 283 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 FAM25E-202ENST00000608562 189 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AL049539.1-201ENST00000611964 459 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.39□□□□□ -1.71
PHGDHO43175 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHGDHO43175 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PHGDHO43175 MTCO1P9-201ENST00000505577 1534 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHGDHO43175 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHGDHO43175 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHGDHO43175 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PHGDHO43175 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PHGDHO43175 RNU6-517P-201ENST00000384362 110 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 RNA5SP397-201ENST00000391323 118 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 CYB5AP4-201ENST00000396692 399 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 AL583834.1-201ENST00000406943 343 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 RNU2-8P-201ENST00000410727 190 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 MIR1911-201ENST00000410783 80 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC004552.1-201ENST00000419089 348 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 USP9YP36-201ENST00000424581 829 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AL590762.4-201ENST00000425885 253 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC016712.1-201ENST00000431088 378 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 RAC1P7-201ENST00000445367 377 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.38□□□□□ -1.71
PHGDHO43175 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.38□□□□□ -1.71
PHGDHO43175 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC079804.1-201ENST00000461922 436 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 RPS26P3-201ENST00000470205 348 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 RPS3AP17-201ENST00000472594 777 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC090543.2-201ENST00000483963 348 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC083982.1-201ENST00000485679 344 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC004057.1-201ENST00000485827 348 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC007686.1-201ENST00000488511 463 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC107401.1-201ENST00000503426 685 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 OR51K1P-201ENST00000510214 950 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.38□□□□□ -1.71
PHGDHO43175 RNA5SP154-201ENST00000516193 111 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 RNU6-798P-201ENST00000516912 103 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.38□□□□□ -1.71
PHGDHO43175 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.38□□□□□ -1.71
PHGDHO43175 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 AL391813.2-201ENST00000609113 322 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 TUG1_1.1-201ENST00000610654 145 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 MIR6891-201ENST00000618788 93 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AL136964.1-201ENST00000622038 2990 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AC095031.1-201ENST00000623685 672 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 AL159972.1-201ENST00000625150 448 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 OR5AK4P-201ENST00000635912 903 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC027290.2-201ENST00000623210 18662 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
PHGDHO43175 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PHGDHO43175 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PHGDHO43175 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PHGDHO43175 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.38□□□□□ -1.71
PHGDHO43175 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PHGDHO43175 AC024560.2-201ENST00000507981 1497 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 AL356489.2-201ENST00000566968 3528 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PHGDHO43175 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PHGDHO43175 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 Y_RNA.6-201ENST00000362350 114 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 RNA5SP87-201ENST00000384155 118 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AL137014.1-201ENST00000420490 1226 ntBASIC4.37□□□□□ -1.71
PHGDHO43175 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.37□□□□□ -1.71
PHGDHO43175 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.37□□□□□ -1.71
PHGDHO43175 C8orf59P1-201ENST00000429930 303 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms