Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL590233.1-201ENST00000430017 456 ntBASIC3.68□□□□□ -1.82
TO15178 MTND1P20-201ENST00000430341 950 ntBASIC3.68□□□□□ -1.82
TO15178 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.68□□□□□ -1.82
TO15178 MTCYBP39-201ENST00000437562 491 ntBASIC3.68□□□□□ -1.82
TO15178 MUPP-201ENST00000438111 566 ntBASIC3.68□□□□□ -1.82
TO15178 EEF1E1P1-201ENST00000446998 430 ntBASIC3.68□□□□□ -1.82
TO15178 RPS11P1-201ENST00000451072 473 ntBASIC3.68□□□□□ -1.82
TO15178 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.68□□□□□ -1.82
TO15178 AC103987.1-201ENST00000473394 348 ntBASIC3.68□□□□□ -1.82
TO15178 AC072039.1-201ENST00000477611 581 ntBASIC3.68□□□□□ -1.82
TO15178 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.68□□□□□ -1.82
TO15178 AC002456.2-201ENST00000509356 380 ntBASIC3.68□□□□□ -1.82
TO15178 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.68□□□□□ -1.82
TO15178 MTCO1P47-201ENST00000523889 1271 ntBASIC3.68□□□□□ -1.82
TO15178 YPEL5P3-201ENST00000547227 352 ntBASIC3.68□□□□□ -1.82
TO15178 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.68□□□□□ -1.82
TO15178 AC007954.1-201ENST00000554198 494 ntBASIC3.68□□□□□ -1.82
TO15178 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.68□□□□□ -1.82
TO15178 AC090888.1-201ENST00000561335 1141 ntBASIC3.68□□□□□ -1.82
TO15178 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.68□□□□□ -1.82
TO15178 AC008088.1-201ENST00000580993 280 ntBASIC3.68□□□□□ -1.82
TO15178 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
TO15178 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.68□□□□□ -1.82
TO15178 DUXAP11-201ENST00000603858 526 ntBASIC3.68□□□□□ -1.82
TO15178 AC004223.4-201ENST00000612426 332 ntBASIC3.68□□□□□ -1.82
TO15178 AC122133.1-201ENST00000613964 233 ntBASIC3.68□□□□□ -1.82
TO15178 ZYXP1-201ENST00000617638 118 ntBASIC3.68□□□□□ -1.82
TO15178 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
TO15178 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.68□□□□□ -1.82
TO15178 AL022578.1-201ENST00000439330 1433 ntBASIC3.68□□□□□ -1.82
TO15178 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TO15178 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
TO15178 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
TO15178 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.67□□□□□ -1.82
TO15178 RNA5SP399-201ENST00000364003 117 ntBASIC3.67□□□□□ -1.82
TO15178 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 RNU6-723P-201ENST00000383973 107 ntBASIC3.67□□□□□ -1.82
TO15178 MTHFD2P2-201ENST00000407725 247 ntBASIC3.67□□□□□ -1.82
TO15178 RNU4-78P-201ENST00000410940 126 ntBASIC3.67□□□□□ -1.82
TO15178 RPL7AP73-201ENST00000413490 353 ntBASIC3.67□□□□□ -1.82
TO15178 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 USP9YP26-201ENST00000421008 661 ntBASIC3.67□□□□□ -1.82
TO15178 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TO15178 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.67□□□□□ -1.82
TO15178 AL691449.1-201ENST00000426570 421 ntBASIC3.67□□□□□ -1.82
TO15178 AL117339.2-201ENST00000430475 180 ntBASIC3.67□□□□□ -1.82
TO15178 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.67□□□□□ -1.82
TO15178 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.67□□□□□ -1.82
TO15178 AL590103.1-201ENST00000434488 307 ntBASIC3.67□□□□□ -1.82
TO15178 UBE2FP3-201ENST00000436366 524 ntBASIC3.67□□□□□ -1.82
TO15178 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TO15178 AF228730.2-201ENST00000438784 848 ntBASIC3.67□□□□□ -1.82
TO15178 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.67□□□□□ -1.82
TO15178 RPL21P89-201ENST00000444021 467 ntBASIC3.67□□□□□ -1.82
TO15178 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.67□□□□□ -1.82
TO15178 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
TO15178 AP001992.1-205ENST00000462248 379 ntBASIC3.67□□□□□ -1.82
TO15178 RPL31P50-201ENST00000471002 296 ntBASIC3.67□□□□□ -1.82
TO15178 BET1P1-201ENST00000482276 359 ntBASIC3.67□□□□□ -1.82
TO15178 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 AC110792.1-201ENST00000491826 472 ntBASIC3.67□□□□□ -1.82
TO15178 RPL31P61-201ENST00000496160 376 ntBASIC3.67□□□□□ -1.82
TO15178 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.67□□□□□ -1.82
TO15178 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 LTV1P1-201ENST00000510683 1237 ntBASIC3.67□□□□□ -1.82
TO15178 FTH1P21-201ENST00000512179 511 ntBASIC3.67□□□□□ -1.82
TO15178 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.67□□□□□ -1.82
TO15178 AC093853.1-201ENST00000515689 483 ntBASIC3.67□□□□□ -1.82
TO15178 RN7SKP21-201ENST00000516503 220 ntBASIC3.67□□□□□ -1.82
TO15178 RN7SKP289-201ENST00000517244 295 ntBASIC3.67□□□□□ -1.82
TO15178 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.67□□□□□ -1.82
TO15178 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
TO15178 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 AC136618.2-201ENST00000575091 400 ntBASIC3.67□□□□□ -1.82
TO15178 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.67□□□□□ -1.82
TO15178 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.67□□□□□ -1.82
TO15178 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.67□□□□□ -1.82
TO15178 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.67□□□□□ -1.82
TO15178 AC128687.2-201ENST00000609657 566 ntBASIC3.67□□□□□ -1.82
TO15178 MIR8058-201ENST00000615737 89 ntBASIC3.67□□□□□ -1.82
TO15178 AC040168.1-201ENST00000623594 991 ntBASIC3.67□□□□□ -1.82
TO15178 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TO15178 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.67□□□□□ -1.82
TO15178 RPS4XP5-202ENST00000449995 1334 ntBASIC3.67□□□□□ -1.82
TO15178 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
TO15178 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TO15178 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TO15178 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms