Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC112198.1-201ENST00000505369 1220 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.23□□□□□ -1.89
CDX4O14627 AC109471.1-201ENST00000511631 612 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC026801.2-201ENST00000515352 425 ntBASIC3.23□□□□□ -1.89
CDX4O14627 ARL2BPP5-201ENST00000523141 481 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.23□□□□□ -1.89
CDX4O14627 AC023538.1-201ENST00000534576 736 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.23□□□□□ -1.89
CDX4O14627 CBX3P5-201ENST00000552017 521 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.23□□□□□ -1.89
CDX4O14627 CENPUP2-201ENST00000555897 1186 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.23□□□□□ -1.89
CDX4O14627 AC093519.1-201ENST00000566109 298 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC104984.5-201ENST00000586878 94 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 KLKP1-201ENST00000595979 403 ntBASIC3.23□□□□□ -1.89
CDX4O14627 GAS5-AS1-201ENST00000602767 694 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AL139395.1-201ENST00000603662 160 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC025811.1-201ENST00000604312 472 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC021749.1-201ENST00000604322 607 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC013412.1-201ENST00000610687 192 ntBASIC3.23□□□□□ -1.89
CDX4O14627 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.23□□□□□ -1.89
CDX4O14627 AC010975.3-201ENST00000618727 978 ntBASIC3.23□□□□□ -1.89
CDX4O14627 AC068057.2-201ENST00000624047 895 ntBASIC3.23□□□□□ -1.89
CDX4O14627 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 MTND5P31-201ENST00000419366 1374 ntBASIC3.23□□□□□ -1.89
CDX4O14627 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 SAGE4P-201ENST00000442271 3381 ntBASIC3.23□□□□□ -1.89
CDX4O14627 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 AL021368.2-201ENST00000606125 5352 ntBASIC3.23□□□□□ -1.89
CDX4O14627 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDX4O14627 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.23□□□□□ -1.89
CDX4O14627 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDX4O14627 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDX4O14627 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDX4O14627 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDX4O14627 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDX4O14627 RNU6-1066P-201ENST00000363573 105 ntBASIC3.22□□□□□ -1.89
CDX4O14627 SNORA70E-201ENST00000384492 135 ntBASIC3.22□□□□□ -1.89
CDX4O14627 MIR3074-201ENST00000384885 81 ntBASIC3.22□□□□□ -1.89
CDX4O14627 MIR513A2-201ENST00000385249 127 ntBASIC3.22□□□□□ -1.89
CDX4O14627 TAS2R15P-201ENST00000390674 928 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AL139095.1-201ENST00000404326 391 ntBASIC3.22□□□□□ -1.89
CDX4O14627 BTBD10P2-201ENST00000404779 676 ntBASIC3.22□□□□□ -1.89
CDX4O14627 RNA5SP306-201ENST00000411087 107 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.22□□□□□ -1.89
CDX4O14627 IFNNP1-201ENST00000429219 553 ntBASIC3.22□□□□□ -1.89
CDX4O14627 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 Z77249.1-201ENST00000444622 1175 ntBASIC3.22□□□□□ -1.89
CDX4O14627 MTATP6P26-201ENST00000445926 662 ntBASIC3.22□□□□□ -1.89
CDX4O14627 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.22□□□□□ -1.89
CDX4O14627 NF1P3-201ENST00000457709 450 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC087385.1-201ENST00000475062 312 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AC011352.3-201ENST00000505162 593 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 AC113347.3-201ENST00000509113 148 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC010486.1-201ENST00000511793 424 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 MTCYBP27-201ENST00000555160 670 ntBASIC3.22□□□□□ -1.89
CDX4O14627 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.22□□□□□ -1.89
CDX4O14627 AL157394.1-201ENST00000562983 1224 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.22□□□□□ -1.89
CDX4O14627 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.22□□□□□ -1.89
CDX4O14627 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 VN1R79P-201ENST00000593540 513 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 AC121761.2-201ENST00000617300 689 ntBASIC3.22□□□□□ -1.89
CDX4O14627 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.22□□□□□ -1.89
CDX4O14627 AP002791.1-201ENST00000623291 381 ntBASIC3.22□□□□□ -1.89
CDX4O14627 AC120349.3-201ENST00000624377 529 ntBASIC3.22□□□□□ -1.89
CDX4O14627 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.22□□□□□ -1.89
CDX4O14627 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
CDX4O14627 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDX4O14627 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.22□□□□□ -1.89
CDX4O14627 Z99496.1-201ENST00000469424 1477 ntBASIC3.22□□□□□ -1.89
CDX4O14627 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.21□□□□□ -1.89
CDX4O14627 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.21□□□□□ -1.89
CDX4O14627 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms