Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTCAO00442 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.61□□□□□ -1.83
RTCAO00442 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
RTCAO00442 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTCAO00442 RNU1-101P-201ENST00000391171 127 ntBASIC3.61□□□□□ -1.83
RTCAO00442 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AL354719.1-201ENST00000406535 843 ntBASIC3.61□□□□□ -1.83
RTCAO00442 FAT1P1-201ENST00000406588 507 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 AL137014.1-201ENST00000420490 1226 ntBASIC3.61□□□□□ -1.83
RTCAO00442 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 EZH2P1-201ENST00000431167 291 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RTCAO00442 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.61□□□□□ -1.83
RTCAO00442 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.61□□□□□ -1.83
RTCAO00442 Z95327.1-201ENST00000446082 482 ntBASIC3.61□□□□□ -1.83
RTCAO00442 NANOGP10-201ENST00000453325 895 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AC108941.1-201ENST00000502853 530 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.61□□□□□ -1.83
RTCAO00442 AC004069.2-201ENST00000505438 1114 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
RTCAO00442 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.61□□□□□ -1.83
RTCAO00442 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 SETP7-201ENST00000552169 453 ntBASIC3.61□□□□□ -1.83
RTCAO00442 NBEAP1-201ENST00000554452 979 ntBASIC3.61□□□□□ -1.83
RTCAO00442 GTF2IP8-201ENST00000560687 584 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.61□□□□□ -1.83
RTCAO00442 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.61□□□□□ -1.83
RTCAO00442 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.61□□□□□ -1.83
RTCAO00442 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.61□□□□□ -1.83
RTCAO00442 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AL451074.6-201ENST00000608512 729 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.61□□□□□ -1.83
RTCAO00442 AC005332.6-201ENST00000613178 446 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AL138880.2-201ENST00000616214 239 ntBASIC3.61□□□□□ -1.83
RTCAO00442 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTCAO00442 AC109809.1-201ENST00000619665 545 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AC103858.2-201ENST00000621471 543 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AL354798.1-201ENST00000622505 329 ntBASIC3.61□□□□□ -1.83
RTCAO00442 AP002782.1-201ENST00000623107 614 ntBASIC3.61□□□□□ -1.83
RTCAO00442 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.61□□□□□ -1.83
RTCAO00442 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTCAO00442 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTCAO00442 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
RTCAO00442 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 RNU6-1155P-201ENST00000363554 107 ntBASIC3.6□□□□□ -1.83
RTCAO00442 EI24P2-201ENST00000397776 1076 ntBASIC3.6□□□□□ -1.83
RTCAO00442 RNA5SP80-201ENST00000410475 111 ntBASIC3.6□□□□□ -1.83
RTCAO00442 RN7SKP263-201ENST00000411194 309 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 HIGD1AP15-201ENST00000416198 280 ntBASIC3.6□□□□□ -1.83
RTCAO00442 RPL17P36-201ENST00000420302 549 ntBASIC3.6□□□□□ -1.83
RTCAO00442 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
RTCAO00442 GTF2IP23-201ENST00000423746 351 ntBASIC3.6□□□□□ -1.83
RTCAO00442 RPL7P2-201ENST00000427639 268 ntBASIC3.6□□□□□ -1.83
RTCAO00442 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AF228730.2-201ENST00000438784 848 ntBASIC3.6□□□□□ -1.83
RTCAO00442 RPL23AP76-201ENST00000441860 458 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.6□□□□□ -1.83
RTCAO00442 USP9YP34-201ENST00000453983 808 ntBASIC3.6□□□□□ -1.83
RTCAO00442 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 AC068587.1-201ENST00000483613 781 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC006483.1-201ENST00000487308 313 ntBASIC3.6□□□□□ -1.83
RTCAO00442 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.6□□□□□ -1.83
RTCAO00442 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTCAO00442 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.6□□□□□ -1.83
RTCAO00442 BTF3L4P4-201ENST00000506381 449 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC008837.2-201ENST00000513076 418 ntBASIC3.6□□□□□ -1.83
RTCAO00442 RN7SKP287-201ENST00000516546 266 ntBASIC3.6□□□□□ -1.83
RTCAO00442 Y_RNA.717-201ENST00000517106 92 ntBASIC3.6□□□□□ -1.83
RTCAO00442 SUMO2P20-201ENST00000520803 283 ntBASIC3.6□□□□□ -1.83
RTCAO00442 MTCO1P49-201ENST00000523429 802 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AP001189.2-201ENST00000527320 189 ntBASIC3.6□□□□□ -1.83
RTCAO00442 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RTCAO00442 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.6□□□□□ -1.83
RTCAO00442 AC084824.1-201ENST00000550917 1005 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.6□□□□□ -1.83
RTCAO00442 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.6□□□□□ -1.83
RTCAO00442 TRAV15-201ENST00000556680 249 ntBASIC3.6□□□□□ -1.83
RTCAO00442 MED28P6-201ENST00000558776 231 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.6□□□□□ -1.83
RTCAO00442 MTATP6P24-201ENST00000576835 677 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC091057.2-201ENST00000602594 792 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC025588.2-201ENST00000604851 466 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC093424.1-201ENST00000604999 338 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC107952.2-201ENST00000606048 486 ntBASIC3.6□□□□□ -1.83
RTCAO00442 SNORA62.6-201ENST00000606322 83 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC007349.4-201ENST00000608114 532 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
RTCAO00442 MIR486-1-201ENST00000612171 68 ntBASIC3.6□□□□□ -1.83
RTCAO00442 AP003122.6-201ENST00000623831 495 ntBASIC3.6□□□□□ -1.83
RTCAO00442 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
RTCAO00442 AC109315.1-201ENST00000584143 1347 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms