Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU6-583P-201ENST00000516012 92 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RNU6-1095P-201ENST00000516148 108 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RNA5SP468-201ENST00000516782 93 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC007991.1-201ENST00000522680 631 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC28A1O00337 HSPA8P13-201ENST00000523715 472 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC011602.1-201ENST00000546484 331 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC28A1O00337 RN7SL339P-201ENST00000580597 296 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RPP40P2-201ENST00000603596 712 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 MTND3P19-201ENST00000603825 345 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC011468.4-201ENST00000603942 409 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC024933.1-201ENST00000608472 348 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AL391497.1-201ENST00000608671 547 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AL450489.1-201ENST00000612071 468 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC025588.4-201ENST00000615802 908 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.37□□□□□ -1.87
SLC28A1O00337 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC28A1O00337 AL357559.1-201ENST00000622228 274 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AL391262.2-201ENST00000622466 494 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC28A1O00337 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SLC28A1O00337 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 AL513302.2-201ENST00000562313 1842 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC28A1O00337 SNORD9-201ENST00000362566 104 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC007066.1-201ENST00000392902 381 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 EI24P2-201ENST00000397776 1076 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 MTCO2P8-201ENST00000412213 658 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC28A1O00337 OR1AA1P-201ENST00000419597 916 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AL513175.2-201ENST00000422071 443 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 NIPA2P1-201ENST00000426223 976 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC079780.1-201ENST00000428259 207 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AL590103.1-201ENST00000434488 307 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC28A1O00337 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC28A1O00337 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC005297.2-201ENST00000450430 606 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.36□□□□□ -1.87
SLC28A1O00337 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 RPL18AP17-201ENST00000455326 198 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC007967.1-201ENST00000455422 1159 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 DUXAP8-207ENST00000456786 622 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 RPL23AP62-201ENST00000463396 453 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC090453.1-201ENST00000495560 436 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 MLLT10P2-201ENST00000506434 249 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 NPM1P41-201ENST00000512920 831 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 FABP5P12-201ENST00000515543 389 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC28A1O00337 AC053481.3-201ENST00000577881 843 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC006116.10-201ENST00000591836 581 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AL451086.1-201ENST00000605596 223 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC144521.1-201ENST00000607148 956 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AL451074.6-201ENST00000608512 729 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 DUXAP10-204ENST00000612052 616 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC016597.2-201ENST00000613256 341 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC022960.3-201ENST00000619794 441 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC015967.1-201ENST00000619893 476 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC28A1O00337 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 AC007823.1-201ENST00000569932 1566 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC28A1O00337 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 MFSD8-236ENST00000641509 4050 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC28A1O00337 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC28A1O00337 AP001148.1-201ENST00000624124 2359 ntBASIC3.36□□□□□ -1.87
SLC28A1O00337 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SLC28A1O00337 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A1O00337 ZNF826P-207ENST00000622273 1910 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 AC097714.1-201ENST00000511272 1647 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 ZNF29P-201ENST00000225587 168 ntBASIC3.35□□□□□ -1.87
SLC28A1O00337 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC28A1O00337 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms