Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC004777.1-201ENST00000624317 287 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AC048347.1-201ENST00000624621 427 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL109659.3-201ENST00000624985 950 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 MTND5P3-201ENST00000438536 1800 ntBASIC3.04□□□□□ -1.92
TRIM49D1C9J1S8 AL157700.1-201ENST00000561973 1432 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC138915.3-201ENST00000562908 1389 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 SNORA63.1-201ENST00000362493 131 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-1293P-201ENST00000384077 107 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 DNAJC19P6-201ENST00000401853 280 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 RNU2-65P-201ENST00000410162 185 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 VN1R51P-201ENST00000411675 945 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AL009174.1-201ENST00000426577 416 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 NEK4P1-201ENST00000433383 879 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 SETP5-201ENST00000437270 562 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC016696.1-201ENST00000446949 318 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 NPM1P49-201ENST00000448027 714 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 USP9YP25-201ENST00000457708 443 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AL139824.2-201ENST00000458731 1095 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 RN7SL863P-201ENST00000462370 296 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC110794.1-201ENST00000505816 425 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC010265.1-201ENST00000513509 211 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-202P-201ENST00000515998 96 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 snoZ278.1-201ENST00000517059 112 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 Y_RNA.717-201ENST00000517106 92 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 DUXAP2-201ENST00000519198 589 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 MTCO3P15-201ENST00000526563 574 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC004217.3-201ENST00000551552 878 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 MIR4506-201ENST00000584693 77 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC010928.3-201ENST00000587712 541 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 NTAN1P1-201ENST00000603150 646 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC092354.2-201ENST00000607786 514 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC019176.2-201ENST00000611579 315 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC009159.2-201ENST00000617603 606 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC138932.5-201ENST00000617759 563 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC007318.2-201ENST00000620999 243 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-156P-201ENST00000621869 107 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 AC092608.3-201ENST00000625017 386 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 XPOTP1-201ENST00000443317 2398 ntBASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM49D1C9J1S8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 NSRP1P1-201ENST00000444067 1693 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL355578.1-201ENST00000607405 1328 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 RNA5SP391-201ENST00000363456 119 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 RNU6-707P-201ENST00000364647 95 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 SNORD116.1-201ENST00000365628 92 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 RNU6-224P-201ENST00000384055 107 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 MIR513B-201ENST00000385136 84 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 RPL7P25-201ENST00000404151 721 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC234782.4-201ENST00000417646 1048 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 MTND4P3-201ENST00000417829 541 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL031313.1-201ENST00000448435 256 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 OFD1P3Y-201ENST00000453312 783 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC092155.2-201ENST00000454675 477 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 RN7SL293P-201ENST00000481765 281 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC108860.1-201ENST00000484521 383 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC090071.1-201ENST00000507713 644 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC112673.1-201ENST00000513168 575 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 CENPUP2-201ENST00000555897 1186 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC044913.1-201ENST00000557200 430 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms