Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC091905.1-201ENST00000624400 311 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MIR3688-2-201ENST00000636963 87 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 MUC2-202ENST00000613187 4845 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 NMD3P1-201ENST00000439704 1488 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 OR5J1P-201ENST00000313544 939 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 Y_RNA.1-201ENST00000352915 104 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 RNY4P14-201ENST00000363656 96 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 RNU1-132P-201ENST00000364300 164 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 PPIAP9-201ENST00000403866 498 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC022028.1-201ENST00000412054 408 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL356095.1-201ENST00000417217 199 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 MTCO2P19-201ENST00000427513 598 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 DPPA2P1-201ENST00000428060 556 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 MRPS18BP2-201ENST00000434310 759 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 ARL2BPP6-201ENST00000512757 439 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC017037.2-201ENST00000513850 890 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 MIR3167-201ENST00000579623 85 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC006504.3-201ENST00000586818 523 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC005000.2-201ENST00000605468 310 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC055876.5-201ENST00000605667 259 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL391261.4-201ENST00000616012 481 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AP006248.2-201ENST00000623309 592 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AL359955.1-201ENST00000455242 3275 ntBASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC85CA6NKD9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC140134.1-201ENST00000511830 3544 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 RNU6-181P-201ENST00000363225 107 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 Y_RNA.256-201ENST00000364594 104 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 SNORA73.2-201ENST00000364946 201 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 RNU4-12P-201ENST00000365233 139 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 Y_RNA.500-201ENST00000384466 111 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 RPL7P60-201ENST00000397636 735 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL590002.1-201ENST00000406554 418 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL603766.1-201ENST00000407763 664 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 MIR1277-201ENST00000408536 78 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC127391.1-201ENST00000411737 98 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 CYCSP32-201ENST00000440548 321 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 RPL7L1P1-201ENST00000448259 785 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 UBDP1-202ENST00000457888 382 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 ST13P14-201ENST00000474095 734 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC007182.2-201ENST00000489251 402 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC009646.1-201ENST00000510455 318 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC010342.1-201ENST00000514047 877 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 RNU6-445P-201ENST00000516949 107 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC090136.1-201ENST00000520009 240 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 OR5AQ1P-201ENST00000527596 927 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL512310.1-201ENST00000548639 172 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL157687.1-201ENST00000554853 619 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 MIR5699-201ENST00000578903 90 ntBASIC5.27□□□□□ -1.57
CCDC85CA6NKD9 AL391646.1-201ENST00000603860 190 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms