Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RN7SL57P-201ENST00000493687 290 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 MTND4LP22-201ENST00000508209 276 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC116337.1-201ENST00000509680 687 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RANP9-201ENST00000519957 271 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC103783.1-201ENST00000520506 373 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AP001922.4-201ENST00000526967 290 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 TOMM20P1-201ENST00000534518 427 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 CR383656.7-201ENST00000548164 174 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC002310.3-201ENST00000569728 723 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC010653.1-201ENST00000571108 881 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC006254.3-201ENST00000603353 884 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 FAM157A-202ENST00000615155 405 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 uc_338.31-201ENST00000615595 186 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC090607.5-201ENST00000615692 224 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 MIR6721-201ENST00000617181 87 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC007792.1-201ENST00000623023 402 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC111152.1-202ENST00000635848 339 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 AC073869.8-201ENST00000641806 335 ntBASIC4.8□□□□□ -1.64
SHISA3A0PJX4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SHISA3A0PJX4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL672167.1-205ENST00000641112 3080 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL359893.1-201ENST00000447628 1580 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC100778.3-201ENST00000580060 1750 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.80-201ENST00000362996 102 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RNU6-946P-201ENST00000383878 107 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 SNORA51.9-201ENST00000384295 124 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 SNORA48.4-201ENST00000391089 134 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RPL21P67-201ENST00000402896 478 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL009179.1-201ENST00000406085 265 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RPLP0P7-201ENST00000416050 667 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 UBE2FP1-201ENST00000416536 447 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC093106.2-201ENST00000428212 385 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL360081.1-201ENST00000428299 555 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RPL23AP69-201ENST00000431134 458 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RPL23AP33-201ENST00000442301 452 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 CYCSP24-201ENST00000445119 316 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC087385.1-201ENST00000475062 312 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC015911.1-201ENST00000495111 156 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AP002812.1-201ENST00000495378 474 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC018797.1-201ENST00000510791 255 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 SNORA14.1-201ENST00000516113 141 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 RN7SKP35-201ENST00000517210 151 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC105031.1-201ENST00000518550 476 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC084121.1-201ENST00000533882 835 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 MTCO3P23-201ENST00000561363 289 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC008269.2-201ENST00000561915 1105 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL355598.1-201ENST00000604169 202 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC010680.4-201ENST00000605334 543 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC090425.1-201ENST00000610007 140 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 PISRT1.1-201ENST00000616930 107 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 uc_338.7-201ENST00000621834 124 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC073869.10-201ENST00000642016 354 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AL121839.2-201ENST00000565058 6943 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 DDX10P1-201ENST00000448545 1933 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
SHISA3A0PJX4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.79□□□□□ -1.64
SHISA3A0PJX4 AC090337.1-201ENST00000579651 2074 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms