Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RPL23AP92-201ENST00000603609 255 ntBASIC1.72□□□□□ -2.13
UBE2D4Q9Y2X8 AC093732.2-201ENST00000607950 274 ntBASIC1.72□□□□□ -2.13
UBE2D4Q9Y2X8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
UBE2D4Q9Y2X8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
UBE2D4Q9Y2X8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
UBE2D4Q9Y2X8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC007336.1-201ENST00000576365 3828 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL139276.1-201ENST00000311910 1001 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 SNORA67.1-201ENST00000364749 141 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 MIR128-1-201ENST00000384921 82 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 FAT1P1-201ENST00000406588 507 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 U3.37-201ENST00000408528 213 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 RN7SKP222-201ENST00000410651 315 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AF274854.1-201ENST00000413236 615 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC073508.1-201ENST00000428866 656 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL513328.1-201ENST00000446460 224 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 NAMPTP2-201ENST00000505629 1115 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC096725.1-201ENST00000514266 313 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC087373.1-201ENST00000524920 491 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 NOP56P3-201ENST00000549457 385 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 OR4U1P-201ENST00000554958 912 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AL451007.1-201ENST00000595491 289 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 U4.3-201ENST00000621047 82 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 AC012321.1-201ENST00000561622 1588 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 PABPC1P7-201ENST00000413177 1513 ntBASIC1.71□□□□□ -2.14
UBE2D4Q9Y2X8 SNORA14A-201ENST00000364773 135 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 SNORA44-201ENST00000384584 132 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AL360182.1-201ENST00000397433 468 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AL158825.1-201ENST00000414735 521 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 COTL1P1-201ENST00000422309 375 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 RPS26P56-201ENST00000444468 240 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 RPS4XP6-201ENST00000477670 797 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 DSTNP2-201ENST00000504533 515 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 HIGD1AP3-201ENST00000515857 278 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 RNU1-61P-201ENST00000516107 151 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 MIR5694-201ENST00000581190 76 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AL161734.1-201ENST00000609720 557 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC103798.2-201ENST00000624292 632 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 MAPK10-266ENST00000641066 6555 ntBASIC1.7□□□□□ -2.14
UBE2D4Q9Y2X8 AC087565.3-202ENST00000642085 1603 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RPL21P132-201ENST00000331267 462 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 MIR21-201ENST00000362134 72 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RNU6-859P-201ENST00000362728 107 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 SNORD114-30-201ENST00000364448 72 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RNU1-51P-201ENST00000365345 176 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC092447.6-201ENST00000414578 210 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RPL7P44-201ENST00000424827 742 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RPS24P8-201ENST00000431490 402 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 PTP4A1P3-201ENST00000433661 420 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC104389.3-201ENST00000445629 235 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RPL34P26-201ENST00000445636 354 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AL445669.2-201ENST00000454425 421 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 RPL37P6-202ENST00000464216 403 ntBASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.69□□□□□ -2.14
UBE2D4Q9Y2X8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms