Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 MIR5004-201ENST00000579078 107 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 CCDC58P3-201ENST00000590792 430 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC073387.2-201ENST00000604797 784 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AL020991.1-201ENST00000612314 373 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC006963.1-201ENST00000624003 1052 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC004777.1-201ENST00000624317 287 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AL109659.3-201ENST00000624985 950 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 GABRG2-229ENST00000641017 3628 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC006378.2-201ENST00000623178 2476 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 MAPK10-322ENST00000641485 4530 ntBASIC2.16□□□□□ -2.06
HHLA3Q9XRX5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
HHLA3Q9XRX5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HHLA3Q9XRX5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
HHLA3Q9XRX5 SNORA71.1-201ENST00000364523 117 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RNU6-1181P-201ENST00000384191 106 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 SNORD67-201ENST00000390833 111 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 SFR1P1-201ENST00000403720 688 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RNA5SP56-201ENST00000410277 118 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RNU6-272P-201ENST00000411028 104 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 YPEL5P1-201ENST00000419731 367 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 USP9YP36-201ENST00000424581 829 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC114973.1-201ENST00000429057 632 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC022018.1-201ENST00000430685 241 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC010881.1-201ENST00000433830 235 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RABEPKP1-201ENST00000440529 1026 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RPS26P30-201ENST00000443431 335 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RPL17P49-201ENST00000443728 411 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RPS26P56-201ENST00000444468 240 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 MTND2P6-201ENST00000455337 1030 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RPS27P23-201ENST00000487608 251 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RN7SL504P-201ENST00000494496 287 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 RNF138P1-201ENST00000502765 546 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 MTCO3P44-201ENST00000510977 541 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC133963.2-201ENST00000513686 578 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 ELOCP31-201ENST00000540463 467 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC092470.1-201ENST00000546187 132 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC093014.1-201ENST00000548926 724 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 BNIP3P33-201ENST00000598912 569 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC113368.1-201ENST00000603736 382 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 BX322635.1-201ENST00000605804 496 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC100793.4-201ENST00000613683 429 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AL392048.1-201ENST00000613946 534 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC002076.2-201ENST00000617362 122 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AP003400.6-201ENST00000624698 740 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC092608.3-201ENST00000625017 386 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC046144.1-201ENST00000478559 1853 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AL136520.1-201ENST00000600311 1322 ntBASIC2.15□□□□□ -2.07
HHLA3Q9XRX5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 AP003122.5-201ENST00000527668 3766 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 RNU6-1151P-201ENST00000384684 107 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 RPL19P1-201ENST00000411635 428 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 HMGN2P35-201ENST00000412164 270 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 MRPL50P2-201ENST00000416821 482 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 RPS3AP9-201ENST00000417027 792 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 KRR1P1-201ENST00000419430 803 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 PNRC2P1-201ENST00000423940 420 ntBASIC2.14□□□□□ -2.07
HHLA3Q9XRX5 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms