Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AL133153.1-201ENST00000557756 303 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 MIR5701-3-201ENST00000578890 82 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 MIR5701-1-201ENST00000585138 82 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AL121917.1-203ENST00000605534 577 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 HSPE1P14-201ENST00000605812 302 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 MIR5701-2-201ENST00000615634 82 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 AC068769.1-201ENST00000474767 2426 ntBASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TRIM35Q9UPQ4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 HSP90AA4P-202ENST00000506915 2228 ntBASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.71□□□□□ -1.17
TRIM35Q9UPQ4 XIAPP3-201ENST00000312918 795 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 RNU6-834P-201ENST00000362367 110 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 RNU6-923P-201ENST00000364753 107 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 CRP-202ENST00000368110 667 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 SNORA11.3-201ENST00000408471 128 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AL035660.1-201ENST00000422041 222 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 NUTF2P7-201ENST00000453086 375 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 TRBV26-201ENST00000456572 344 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AC022133.1-201ENST00000490961 571 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AC005798.1-201ENST00000513715 387 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 MIR2117-201ENST00000516780 80 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 SOD1P3-201ENST00000518682 454 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 SNORA11.6-201ENST00000619030 128 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AC097372.5-201ENST00000623665 376 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 PARP4P2-201ENST00000446672 3326 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 AC005225.5-201ENST00000623547 2225 ntBASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM35Q9UPQ4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 RNU6-700P-201ENST00000391043 107 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 RPS29P14-201ENST00000431518 171 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC091180.1-201ENST00000462104 372 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 RPL21P103-201ENST00000479921 488 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC010409.1-201ENST00000487382 476 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC091144.1-201ENST00000519573 138 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 SNORD39.2-201ENST00000579995 76 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 MIR6861-201ENST00000618657 64 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AC243829.7-201ENST00000633081 225 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 U6.92-201ENST00000636464 89 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 AL137058.3-201ENST00000624531 3099 ntBASIC7.7□□□□□ -1.18
TRIM35Q9UPQ4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM35Q9UPQ4 AC009779.8-201ENST00000641684 4384 ntBASIC7.69□□□□□ -1.18
TRIM35Q9UPQ4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
TRIM35Q9UPQ4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM35Q9UPQ4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM35Q9UPQ4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TRIM35Q9UPQ4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms