Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC016877.3-201ENST00000606778 504 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 TNPO1P3-201ENST00000436471 2662 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 Y_RNA.472-201ENST00000384322 102 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AL138885.1-201ENST00000405921 675 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 HMGB3P30-201ENST00000457863 606 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 SNORA48.10-201ENST00000516965 160 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AP000926.4-201ENST00000527351 454 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AL162713.1-201ENST00000604480 262 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 IGHV3-29-201ENST00000604817 344 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 RNU4-5P-201ENST00000607255 135 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 AL121895.2-201ENST00000619558 447 ntBASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SHROOM4Q9ULL8 CEP170P1-201ENST00000502249 4587 ntBASIC6.4□□□□□ -1.38
SHROOM4Q9ULL8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 MIR422A-201ENST00000362286 90 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 RN7SKP44-201ENST00000363602 316 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 MT-TC-201ENST00000387405 66 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 SNORA40.2-201ENST00000390847 128 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 Z99755.1-201ENST00000414048 380 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 RPS3AP37-201ENST00000419176 745 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 MTND2P16-201ENST00000419987 799 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 OFD1P18Y-201ENST00000420889 959 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AL353678.1-201ENST00000422735 741 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 NANOGP2-201ENST00000435391 727 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC007327.1-201ENST00000447461 264 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 MTCO1P48-201ENST00000448024 1096 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC025445.1-201ENST00000502728 300 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 RNVU1-4-201ENST00000612985 164 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AL158163.2-201ENST00000619110 700 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 AC006065.5-201ENST00000623427 349 ntBASIC6.4□□□□□ -1.39
SHROOM4Q9ULL8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AL513175.2-201ENST00000422071 443 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 NANOGP5-201ENST00000424456 877 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 PTGES3P5-201ENST00000455109 434 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 RPS3AP50-201ENST00000487064 803 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AC113430.1-201ENST00000506872 718 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 RNU6-1261P-201ENST00000517194 104 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AC026333.2-201ENST00000542164 106 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AL132857.1-201ENST00000555180 708 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 VN1R83P-201ENST00000595685 445 ntBASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.39□□□□□ -1.39
SHROOM4Q9ULL8 NCAPGP1-201ENST00000505112 1814 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 ZNF734P-201ENST00000419494 1534 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 RNU2-42P-201ENST00000410697 113 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC004552.1-201ENST00000419089 348 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 EEF1A1P39-201ENST00000440791 250 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC090543.2-201ENST00000483963 348 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 PRELID3BP7-201ENST00000503606 469 ntBASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM4Q9ULL8 IGKV2D-36-201ENST00000518643 226 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms