Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 RNA5SP515-201ENST00000364570 118 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 RNA5SP189-201ENST00000364920 115 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 RPL31P1-201ENST00000398116 372 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 RN7SKP111-201ENST00000410349 271 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 FNDC3CP-201ENST00000420795 1155 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 MRPS36P1-201ENST00000421291 307 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC006548.1-201ENST00000427470 102 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 MTCYBP31-201ENST00000438855 1122 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 NPM1P49-201ENST00000448027 714 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC108734.3-201ENST00000481241 1165 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC093767.1-201ENST00000504523 156 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 MTCYBP16-201ENST00000509187 1129 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 SCARNA1-201ENST00000517138 166 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC103843.2-201ENST00000530523 682 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 MTCYBP23-201ENST00000558717 1102 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC055876.1-202ENST00000567053 138 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 MTND3P13-201ENST00000574391 343 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 VN1R83P-201ENST00000595685 445 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC021749.1-201ENST00000604322 607 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC144521.1-201ENST00000607148 956 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AL121895.2-201ENST00000619558 447 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 CR381572.1-201ENST00000625098 102 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AC084035.1-201ENST00000634543 607 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 AL365440.1-201ENST00000436135 2167 ntBASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RIMS3Q9UJD0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RIMS3Q9UJD0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RIMS3Q9UJD0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
RIMS3Q9UJD0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 Y_RNA.25-201ENST00000362528 102 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 SNORA7.2-201ENST00000364446 145 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 SNORD82-201ENST00000365530 70 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AL359837.1-201ENST00000381357 287 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RNU6-657P-201ENST00000383904 107 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 Y_RNA.472-201ENST00000384322 102 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RNU4-78P-201ENST00000410940 126 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RPL21P112-201ENST00000434403 463 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC127537.2-201ENST00000439258 465 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 EXOSC3P1-201ENST00000448649 500 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RPL9P32-201ENST00000464118 620 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 ACTR3P3-201ENST00000480448 893 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC108860.1-201ENST00000484521 383 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC104619.4-201ENST00000510773 249 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RN7SKP13-201ENST00000515933 244 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RNU1-95P-201ENST00000516357 160 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 RNU1-128P-201ENST00000516704 160 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 GTF2IP22-201ENST00000554443 182 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC024933.1-201ENST00000608472 348 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AL591516.1-201ENST00000611326 274 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC024941.1-201ENST00000612250 334 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC023158.2-201ENST00000614876 543 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AL158163.2-201ENST00000619110 700 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 LINC02211-204ENST00000642024 1070 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 GDI2P1-201ENST00000429312 1336 ntBASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RIMS3Q9UJD0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms