| CNTNAP2 | Q9UHC6 | AC098617.1-203 | ENST00000609865 | 277 nt | TSL 5 BASIC | 4.17 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC079684.1-201 | ENST00000621405 | 437 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | RPL23AP61-201 | ENST00000623642 | 466 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | MIR6715B-201 | ENST00000637172 | 77 nt | BASIC | 4.17 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | ADGRG4-201 | ENST00000370652 | 9820 nt | APPRIS P2 TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | Z73965.1-201 | ENST00000623412 | 2297 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | FAT3-204 | ENST00000525166 | 18699 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | C2orf16-202 | ENST00000447166 | 16401 nt | APPRIS ALT2 TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | PCDH15-203 | ENST00000373955 | 4230 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | FMNL2-202 | ENST00000475377 | 3648 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | LINC01505-206 | ENST00000637046 | 4266 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | MIR181A1HG-203 | ENST00000436880 | 2308 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | ERBB4-203 | ENST00000402597 | 11699 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | SNORA73.2-201 | ENST00000364946 | 201 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | C1orf105-203 | ENST00000367727 | 985 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | RNU6-1200P-201 | ENST00000384162 | 107 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | TRGV11-201 | ENST00000390340 | 463 nt | APPRIS P1 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | TRAJ16-201 | ENST00000390521 | 60 nt | APPRIS P1 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC007066.1-201 | ENST00000392902 | 381 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | RNU6-757P-201 | ENST00000410334 | 100 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | Z75741.2-201 | ENST00000417272 | 1167 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC048351.1-201 | ENST00000420064 | 602 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AL672277.1-201 | ENST00000420865 | 588 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | C21orf91-OT1-202 | ENST00000430815 | 717 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC087650.1-201 | ENST00000431445 | 468 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC068058.1-201 | ENST00000435782 | 389 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | ARPC3P1-201 | ENST00000437218 | 533 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | LINC00415-201 | ENST00000439079 | 435 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | SPIN4-AS1-201 | ENST00000451979 | 426 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | PLSCR5-AS1-201 | ENST00000473817 | 450 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | RPS4XP6-201 | ENST00000477670 | 797 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC084198.1-201 | ENST00000477747 | 402 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC109486.1-201 | ENST00000486833 | 374 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | FCF1P3-201 | ENST00000496394 | 590 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | ARNTL2-AS1-201 | ENST00000500498 | 804 nt | TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC084024.2-201 | ENST00000503480 | 791 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC079340.1-201 | ENST00000504799 | 552 nt | TSL 4 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | CRISP1-203 | ENST00000505118 | 1296 nt | APPRIS P1 TSL 1 (best) BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC016687.2-203 | ENST00000506650 | 578 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | HMGN1P11-201 | ENST00000508668 | 303 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | RAC1P2-201 | ENST00000511164 | 579 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | LINC02241-202 | ENST00000512688 | 467 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | RFESD-208 | ENST00000513950 | 464 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC084116.2-201 | ENST00000520171 | 415 nt | TSL 4 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC087341.1-201 | ENST00000521490 | 491 nt | TSL 2 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | OR5AK3P-201 | ENST00000527486 | 1297 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC073530.1-201 | ENST00000535917 | 775 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | LINC02293-201 | ENST00000548335 | 574 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC025265.2-201 | ENST00000551905 | 478 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC026888.1-201 | ENST00000553348 | 559 nt | TSL 4 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC068446.3-201 | ENST00000555285 | 382 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC022662.1-201 | ENST00000580252 | 331 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | LINC01900-202 | ENST00000584898 | 603 nt | TSL 5 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | MIR4999-201 | ENST00000585029 | 91 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AL138686.1-201 | ENST00000612699 | 315 nt | TSL 3 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC025594.3-201 | ENST00000613068 | 790 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AL121759.2-201 | ENST00000636173 | 570 nt | TSL 4 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | ATE1-AS1-202 | ENST00000636460 | 506 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC119674.1-212 | ENST00000641155 | 993 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | OR5T1-201 | ENST00000641368 | 1118 nt | APPRIS P1 BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC018555.1-201 | ENST00000567548 | 1980 nt | BASIC | 4.16 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | KMO-204 | ENST00000366559 | 5261 nt | APPRIS P2 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | CLUL1-208 | ENST00000581619 | 2449 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AL133412.1-201 | ENST00000380194 | 2992 nt | BASIC | 4.15 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | OR9H1P-201 | ENST00000446393 | 4888 nt | APPRIS P1 BASIC | 4.15 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | SCN3A-201 | ENST00000283254 | 9091 nt | APPRIS P3 TSL 1 (best) BASIC | 4.15 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | AC024560.2-201 | ENST00000507981 | 1497 nt | BASIC | 4.15 | □□□□□ -1.74 | | |
| CNTNAP2 | Q9UHC6 | OFD1P5Y-201 | ENST00000447585 | 2590 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | MTCO1P6-201 | ENST00000481192 | 1384 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC011155.1-201 | ENST00000316512 | 456 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | OR2AP1-201 | ENST00000321688 | 930 nt | APPRIS P1 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | MT-ND4L-201 | ENST00000361335 | 297 nt | APPRIS P1 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RNU6-224P-201 | ENST00000384055 | 107 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RNU6-146P-201 | ENST00000384602 | 108 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | SNORA40.2-201 | ENST00000390847 | 128 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | SNORD115-47-201 | ENST00000391226 | 86 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | SOD2P1-201 | ENST00000396543 | 562 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RPL7P8-201 | ENST00000411964 | 730 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC068599.1-201 | ENST00000422558 | 567 nt | TSL 4 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RNF19BPX-201 | ENST00000426224 | 625 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AFF2-IT1-201 | ENST00000435346 | 443 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | C4orf26-202 | ENST00000435974 | 560 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | SNORA71B-202 | ENST00000439232 | 272 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | ARL5AP2-201 | ENST00000444698 | 533 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RPL6P5-201 | ENST00000445678 | 828 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC007677.1-201 | ENST00000445757 | 515 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | LINC01825-201 | ENST00000452381 | 850 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | CFTRP1-201 | ENST00000456646 | 183 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RNU6-1218P-201 | ENST00000458990 | 108 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | OR4G11P-201 | ENST00000492842 | 939 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | NUDT6-203 | ENST00000502270 | 678 nt | TSL 5 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC117460.1-201 | ENST00000508964 | 467 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC010468.2-201 | ENST00000511981 | 438 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | GTF2H2C-212 | ENST00000512736 | 832 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | SNORA20.3-201 | ENST00000516880 | 132 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | LINC02301-203 | ENST00000555798 | 789 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC009137.1-201 | ENST00000562790 | 260 nt | TSL 3 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | RBBP8-210 | ENST00000581687 | 617 nt | TSL 2 BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AC005730.3-201 | ENST00000583067 | 366 nt | BASIC | 4.15 | □□□□□ -1.75 | | |
| CNTNAP2 | Q9UHC6 | AL022097.1-201 | ENST00000602500 | 806 nt | TSL 1 (best) BASIC | 4.15 | □□□□□ -1.75 | | |