Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC022336.2-201ENST00000568966 2538 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC009501.3-201ENST00000605001 1352 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC091152.2-201ENST00000591628 2569 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AL356292.1-201ENST00000283110 373 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AL139156.1-201ENST00000412785 841 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 HMGB1P11-201ENST00000413899 637 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 XKRY-201ENST00000510392 1100 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 RNU6-964P-201ENST00000516524 69 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AC107918.3-201ENST00000533272 382 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 SNRPGP18-201ENST00000553000 214 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHRF1Q9P1Y6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 XKRY2-202ENST00000623874 1581 ntBASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 XKRY-202ENST00000624960 1581 ntBASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 U8.13-201ENST00000390842 128 ntBASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 Y_RNA.595-201ENST00000410403 105 ntBASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 ELOCP31-201ENST00000540463 467 ntBASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 MIR4498-201ENST00000577599 66 ntBASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PHRF1Q9P1Y6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 RNA5SP88-201ENST00000365560 109 ntBASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 MIR142-201ENST00000384835 87 ntBASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 HMGB1P48-201ENST00000446155 598 ntBASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 AP000926.3-201ENST00000497201 299 ntBASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 AC021733.2-201ENST00000518830 497 ntBASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 NSRP1P1-201ENST00000444067 1693 ntBASIC3.05□□□□□ -1.92
PHRF1Q9P1Y6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 FRG1BP-201ENST00000278882 761 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AL592045.1-201ENST00000429867 352 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 RN7SKP210-201ENST00000459176 261 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC004263.1-201ENST00000479327 332 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC008126.1-201ENST00000549019 480 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC135628.1-201ENST00000568867 534 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC084035.1-201ENST00000634543 607 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AL512646.1-201ENST00000269395 1077 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 Y_RNA.140-201ENST00000363474 103 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 RNA5SP213-201ENST00000391031 106 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AL049830.2-201ENST00000480072 201 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 FAM92A1P2-202ENST00000504766 877 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC099778.2-201ENST00000610904 211 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 AC009831.4-201ENST00000620744 325 ntBASIC3.04□□□□□ -1.92
PHRF1Q9P1Y6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 CDC27P2-201ENST00000425026 1922 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 SNORA79B-201ENST00000410557 148 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 PTP4A1P7-201ENST00000423476 514 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 AC135999.1-201ENST00000478962 479 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 OR9N1P-201ENST00000491296 333 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 RPS27P27-201ENST00000498779 255 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 AC023813.4-201ENST00000607580 580 ntBASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.03□□□□□ -1.92
PHRF1Q9P1Y6 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.02□□□□□ -1.93
PHRF1Q9P1Y6 SNORA25.6-201ENST00000364121 118 ntBASIC3.02□□□□□ -1.93
PHRF1Q9P1Y6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.02□□□□□ -1.93
PHRF1Q9P1Y6 MIR1287-201ENST00000408492 90 ntBASIC3.02□□□□□ -1.93
PHRF1Q9P1Y6 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
PHRF1Q9P1Y6 RPS24P8-201ENST00000431490 402 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms