Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 TAF13P2-201ENST00000416876 286 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 DBIP2-201ENST00000419076 262 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC233728.2-201ENST00000425348 757 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 UBE2D3P3-201ENST00000426992 425 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 MTATP6P4-201ENST00000427725 675 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 RPL26P28-201ENST00000451325 435 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC010468.1-201ENST00000461022 817 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 RPS4XP10-201ENST00000465034 731 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC025518.1-201ENST00000479856 347 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AL358832.1-201ENST00000497800 389 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 CAB39P1-201ENST00000502277 460 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC108078.3-201ENST00000502633 489 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 FCF1P8-201ENST00000510322 597 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC037471.2-201ENST00000564941 598 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC015917.1-201ENST00000579654 510 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 GAS5-AS1-201ENST00000602767 694 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC009318.4-201ENST00000620496 486 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KLHL28Q9NXS3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL512283.1-201ENST00000606756 1384 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 SRP72P2-201ENST00000344851 1979 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC103988.1-201ENST00000566382 2177 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 RNU6-251P-201ENST00000363235 104 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 U6.112-201ENST00000384129 70 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 SNORD116-23-201ENST00000384645 92 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC012065.2-201ENST00000421295 375 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 SFR1P2-201ENST00000421841 730 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 TXNP1-201ENST00000441872 371 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC068724.1-201ENST00000487100 792 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC092185.1-201ENST00000491371 97 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 APOOP4-201ENST00000513530 597 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 RNA5SP135-201ENST00000517019 125 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC011611.1-201ENST00000552179 197 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 NCAPGP2-201ENST00000557911 754 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 MIR3200-201ENST00000580767 85 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC009220.3-201ENST00000604318 586 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL442067.2-201ENST00000614033 363 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AC107308.1-201ENST00000615897 301 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 AL355365.1-201ENST00000616480 294 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 SNORD39.4-201ENST00000620099 78 ntBASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.13□□□□□ -1.91
KLHL28Q9NXS3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KLHL28Q9NXS3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms