Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC105914.1-201ENST00000511798 226 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC139495.1-202ENST00000513164 354 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 RN7SKP83-201ENST00000516512 178 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC008489.1-201ENST00000524271 483 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC025946.2-201ENST00000603398 234 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL391497.1-201ENST00000608671 547 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 TUG1_1.1-201ENST00000610654 145 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 AL731566.2-201ENST00000618971 317 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 RMST_9.1-201ENST00000619945 193 ntBASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
BLOC1S4Q9NUP1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 SGO1P2-201ENST00000429458 1589 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 FAM133CP-201ENST00000332869 704 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 MIR513B-201ENST00000385136 84 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC007066.1-201ENST00000392902 381 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 RN7SKP56-201ENST00000410513 331 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 HMGB3P20-201ENST00000417997 600 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 BEND7P1-201ENST00000422058 457 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 RPL7P2-201ENST00000427639 268 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 Z73417.1-201ENST00000447373 778 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 RPL23AP31-201ENST00000456160 467 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 snoU13.8-201ENST00000458890 104 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 RNU1-61P-201ENST00000516107 151 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 SNRPGP16-201ENST00000533275 226 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC023161.2-201ENST00000551218 780 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 FAM60BP-201ENST00000578364 658 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC006254.3-201ENST00000603353 884 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC004853.1-201ENST00000604902 698 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AL445264.1-201ENST00000621719 171 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AC006504.1-201ENST00000562493 3666 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 AP001148.1-201ENST00000624124 2359 ntBASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BLOC1S4Q9NUP1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 CR381670.1-201ENST00000624291 1693 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 RNA5SP295-201ENST00000362655 121 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC004866.2-201ENST00000438285 481 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AL353691.1-201ENST00000451332 387 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 DNAJC19P1-201ENST00000455312 319 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC104563.1-201ENST00000476147 376 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 RN7SL132P-201ENST00000478131 296 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 TXNP6-201ENST00000510190 310 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 SNORA31.8-201ENST00000516327 108 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 RNU5A-4P-201ENST00000516588 111 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC103783.1-201ENST00000520506 373 ntBASIC4.1□□□□□ -1.75
BLOC1S4Q9NUP1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms