Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR3922-201ENST00000585192 84 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC067852.3-201ENST00000589177 561 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 CCDC58P3-201ENST00000590792 430 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 MIR92B-201ENST00000607575 96 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AL357559.1-201ENST00000622228 274 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC092184.1-201ENST00000625042 715 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 AC116096.1-201ENST00000566804 2314 ntBASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SMC4Q9NTJ3 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.46□□□□□ -1.69
SMC4Q9NTJ3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SMC4Q9NTJ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SMC4Q9NTJ3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 SNORA31-201ENST00000362607 130 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 SNORA7.2-201ENST00000364446 145 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 MIR23A-201ENST00000385245 73 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC016769.3-201ENST00000396562 315 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 ATP5F1P3-201ENST00000397213 657 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AL513174.1-201ENST00000423182 629 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 RPL23AP76-201ENST00000441860 458 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 HMGN2P7-201ENST00000456186 273 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 PLGLA-201ENST00000465668 449 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC025518.1-201ENST00000479856 347 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AL049830.2-201ENST00000480072 201 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AP000563.1-201ENST00000490865 758 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 SLC2A13P1-201ENST00000531560 322 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 MIR3186-201ENST00000577404 85 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 MIR5047-201ENST00000579212 100 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC008739.3-201ENST00000603262 127 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 MTND3P19-201ENST00000603825 345 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC124312.4-201ENST00000605533 310 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC012531.5-201ENST00000611375 151 ntBASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SMC4Q9NTJ3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 RNU6-989P-201ENST00000362756 107 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 RNA5SP189-201ENST00000364920 115 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AL158071.1-201ENST00000430315 461 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AL357552.1-201ENST00000445254 415 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 RPL21P23-201ENST00000446654 460 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 VN1R34P-201ENST00000447387 883 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 NPM1P49-201ENST00000448027 714 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 USP9YP34-201ENST00000453983 808 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 RPS20P24-201ENST00000457473 361 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC021146.1-201ENST00000511202 716 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AP004242.1-201ENST00000533701 349 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC023813.2-201ENST00000564321 469 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 SNORA51-201ENST00000606420 132 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 MIR7851-201ENST00000610611 160 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC107075.1-201ENST00000613695 314 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC109809.1-201ENST00000619665 545 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC243312.2-201ENST00000623340 601 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 MTND2P41-201ENST00000637599 773 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 AL645937.1-201ENST00000641739 1652 ntBASIC4.45□□□□□ -1.7
SMC4Q9NTJ3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SMC4Q9NTJ3 RNU6-636P-201ENST00000384598 107 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms