Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 AC006378.2-201ENST00000623178 2476 ntBASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC6A13Q9NSD5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 Y_RNA.97-201ENST00000363094 102 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-359P-201ENST00000365466 108 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 U3.22-201ENST00000391120 215 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 SNORA26.8-201ENST00000391306 124 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 RPS3AP26-201ENST00000398259 784 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL356421.1-201ENST00000403255 413 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-712P-201ENST00000410558 100 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 RN7SKP182-201ENST00000410772 298 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL389915.1-201ENST00000422463 466 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC244035.1-201ENST00000430042 390 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 COX6B1P7-201ENST00000430845 235 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 MTND4LP10-201ENST00000435146 291 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 RPL23AP46-201ENST00000438548 490 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 CBX1P1-201ENST00000440184 427 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 CDC27P1-201ENST00000445384 715 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 Z82190.1-201ENST00000454534 490 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC078817.1-201ENST00000492623 435 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC034222.1-201ENST00000494052 532 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC099522.1-202ENST00000514718 367 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 NDUFA5P2-201ENST00000519723 344 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC009643.1-201ENST00000532030 391 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 SNRPGP15-201ENST00000600149 222 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL031985.2-201ENST00000600955 480 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AP000403.1-201ENST00000603349 851 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AL022161.1-201ENST00000604390 213 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC092653.1-201ENST00000608509 531 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC093783.1-201ENST00000612976 329 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC083809.1-201ENST00000615051 472 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AP003399.1-201ENST00000637534 361 ntBASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SLC6A13Q9NSD5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 PABPC1P9-201ENST00000426076 1612 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AL513185.3-201ENST00000433335 1300 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 OR11H4-201ENST00000315409 1082 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SNORD35B-201ENST00000363660 87 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SNORD116-9-201ENST00000384000 95 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SNORD116-3-201ENST00000384287 95 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SNORD116-7-201ENST00000384404 95 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 RNU6-769P-201ENST00000384407 104 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 SNORD116-5-201ENST00000384462 95 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 EI24P1-201ENST00000416584 867 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AL445669.1-201ENST00000426743 755 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC087650.1-201ENST00000431445 468 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC098826.1-201ENST00000433943 471 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC129850.1-201ENST00000436203 508 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 KATNBL1P3-201ENST00000443475 909 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 RPL31P3-201ENST00000458430 332 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC011276.1-201ENST00000469688 323 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AL024509.2-201ENST00000493462 493 ntBASIC3.82□□□□□ -1.8
SLC6A13Q9NSD5 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms