Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDC42SE1Q9NRR8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDC42SE1Q9NRR8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.48□□□□□ -2.17
CDC42SE1Q9NRR8 TAB3P1-202ENST00000452645 1634 ntBASIC1.48□□□□□ -2.17
CDC42SE1Q9NRR8 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNU1-35P-201ENST00000362782 153 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-173P-201ENST00000364215 104 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 SNORD51-201ENST00000384320 80 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 MIR138-2-201ENST00000384916 84 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-882P-201ENST00000391025 103 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-1197P-201ENST00000391183 107 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP354-201ENST00000391247 136 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 PPIAP31-201ENST00000405422 495 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL023807.1-201ENST00000407932 359 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNA5SP113-201ENST00000410486 84 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNU2-40P-201ENST00000410833 196 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 NRBF2P2-201ENST00000413087 861 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 HMGN2P38-201ENST00000423806 265 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 SRIP2-201ENST00000428470 166 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 WARS2P1-201ENST00000429678 537 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RPL23AP16-201ENST00000441715 421 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RPL36AP39-201ENST00000445859 318 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL358232.1-201ENST00000448030 501 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC107626.1-201ENST00000471084 183 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 OR52A4P-202ENST00000481634 799 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC093767.1-201ENST00000504523 156 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RNU6-798P-201ENST00000516912 103 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RN7SKP272-201ENST00000516988 232 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RN7SKP147-201ENST00000517154 244 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC109329.2-201ENST00000519658 482 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 COX6CP5-201ENST00000527162 228 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 ZNF705CP-201ENST00000530515 889 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC068339.2-201ENST00000534395 618 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 GLYCAM1-201ENST00000546596 285 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 CR383656.6-201ENST00000550518 394 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 HMGB1P14-201ENST00000557424 591 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC090888.1-201ENST00000561335 1141 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC095057.3-201ENST00000567102 1157 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC090948.1-201ENST00000607464 549 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 MIR6768-201ENST00000610734 72 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC087385.3-201ENST00000620477 187 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 CR381653.2-201ENST00000624041 768 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC124944.3-204ENST00000641191 150 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 CR848007.1-201ENST00000442354 1699 ntBASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDC42SE1Q9NRR8 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.46□□□□□ -2.17
CDC42SE1Q9NRR8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
CDC42SE1Q9NRR8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 MFSD8-213ENST00000641134 1327 ntBASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDC42SE1Q9NRR8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms