Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC025518.1-201ENST00000479856 347 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 HMGB1P28-201ENST00000507778 552 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MTCO1P49-201ENST00000523429 802 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 OR5AK1P-201ENST00000524837 922 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MIR3922-201ENST00000585192 84 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC069304.2-201ENST00000605154 435 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC006270.3-201ENST00000605967 1036 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 AC084782.3-201ENST00000612282 578 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 RNU6-156P-201ENST00000621869 107 ntBASIC3.68□□□□□ -1.82
SIX2Q9NPC8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SIX2Q9NPC8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AL390862.1-201ENST00000635467 1469 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 ELL2P3-201ENST00000457883 1602 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AL161912.2-201ENST00000565707 3007 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 RNU4-35P-201ENST00000362588 141 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 RNA5SP391-201ENST00000363456 119 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 SNORD116-9-201ENST00000384000 95 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 SNORD116-3-201ENST00000384287 95 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 SNORD116-7-201ENST00000384404 95 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 SNORD116-5-201ENST00000384462 95 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 MIR1284-201ENST00000408337 120 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 RN7SKP111-201ENST00000410349 271 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 RN7SKP177-201ENST00000410567 355 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 PIGPP2-201ENST00000411569 458 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 RPL17P36-201ENST00000420302 549 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AL513174.1-201ENST00000423182 629 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC019178.2-201ENST00000423595 505 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 VN1R108P-201ENST00000431580 830 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC023347.2-201ENST00000433994 462 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC007389.2-201ENST00000434630 306 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 MTND2P20-201ENST00000440805 661 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC118469.1-201ENST00000442943 488 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 MTND2P19-201ENST00000449129 1012 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 SLC31A1P1-201ENST00000451221 567 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 RPL18AP17-201ENST00000455326 198 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 NCOR1P1-202ENST00000486162 291 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 KLRA1P-201ENST00000503499 986 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC005178.1-201ENST00000508392 440 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 IGKV2-26-201ENST00000518305 343 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 MED28P5-201ENST00000528254 438 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AL512347.1-201ENST00000566420 503 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC074051.3-201ENST00000570238 358 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AC008507.1-201ENST00000587506 734 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AP000811.1-201ENST00000603803 651 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 AF246928.1-201ENST00000623768 87 ntBASIC3.67□□□□□ -1.82
SIX2Q9NPC8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX2Q9NPC8 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 AC026951.1-201ENST00000559530 2459 ntBASIC3.66□□□□□ -1.82
SIX2Q9NPC8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX2Q9NPC8 PRO1804-201ENST00000623780 2050 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms