Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC010872.1-201ENST00000624225 675 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 RNU1-91P-201ENST00000364746 163 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC104389.3-201ENST00000445629 235 ntBASIC2.24□□□□□ -2.05
CHD8Q9HCK8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.24□□□□□ -2.05
CHD8Q9HCK8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 OR52B1P-201ENST00000316506 909 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 AC092155.2-201ENST00000454675 477 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 RPL23AP71-201ENST00000470966 469 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 RN7SL633P-201ENST00000488974 297 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 CR589904.2-201ENST00000612533 440 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 MAPK10-322ENST00000641485 4530 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 RNU1-57P-201ENST00000384491 166 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 SKINT1L-201ENST00000401057 817 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 SETP15-201ENST00000412724 337 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 AC011611.5-201ENST00000552477 578 ntBASIC2.23□□□□□ -2.05
CHD8Q9HCK8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHD8Q9HCK8 Y_RNA.327-201ENST00000365201 102 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 RNA5SP274-201ENST00000410484 108 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC010338.1-201ENST00000621823 717 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC107081.3-201ENST00000612715 2034 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AL512633.1-201ENST00000399931 655 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 PTP4A1P7-201ENST00000423476 514 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 TOMM22P6-201ENST00000465035 409 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 OR8L1P-201ENST00000534005 955 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 MTND4P26-201ENST00000415971 1359 ntBASIC2.22□□□□□ -2.05
CHD8Q9HCK8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
CHD8Q9HCK8 RNU1-89P-201ENST00000384592 164 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 EIF5P1-201ENST00000400019 1231 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AL022400.1-201ENST00000423946 935 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC090543.2-201ENST00000483963 348 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC104090.1-201ENST00000506341 1171 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC100870.1-201ENST00000522035 505 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 CKS1BP7-201ENST00000522230 235 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 TGIF1P1-201ENST00000558095 802 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 MTCO1P4-201ENST00000520516 1409 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC097714.1-201ENST00000511272 1647 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 MTND5P23-201ENST00000430812 1655 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC072039.1-201ENST00000477611 581 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 OR1AB1P-201ENST00000585564 761 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 AC061975.8-201ENST00000587058 721 ntBASIC2.21□□□□□ -2.06
CHD8Q9HCK8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD8Q9HCK8 U3.6-201ENST00000363622 211 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 ZNF603P-201ENST00000405613 487 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 PPP1R2P5-201ENST00000457256 603 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 RNU1-123P-201ENST00000458950 160 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 KCTD9P5-201ENST00000504141 1170 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 AC021269.2-201ENST00000532318 330 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 AC067747.1-201ENST00000608026 250 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 AL355493.4-201ENST00000618530 292 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 AL592437.1-201ENST00000443781 492 ntBASIC2.2□□□□□ -2.06
CHD8Q9HCK8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHD8Q9HCK8 ATP5EP1-201ENST00000510257 156 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms