Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 OR7K1P-201ENST00000546439 926 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 GTF2IP8-201ENST00000560687 584 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC053481.3-201ENST00000577881 843 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC112230.1-201ENST00000604342 547 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 HMGB1P50-201ENST00000605814 607 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AP003117.2-201ENST00000606010 545 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC090970.3-201ENST00000612566 866 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 U4.5-201ENST00000617137 123 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC007742.2-201ENST00000618226 398 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC069209.1-201ENST00000619282 651 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 OR5H6-203ENST00000642105 978 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AL451142.2-201ENST00000429076 2090 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
EBF3Q9H4W6 AC009313.2-201ENST00000417893 1941 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 FAM35DP-201ENST00000323387 2712 ntBASIC4.23□□□□□ -1.73
EBF3Q9H4W6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 RNU6-660P-201ENST00000364566 109 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 RPL23AP48-201ENST00000406913 488 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC092647.1-201ENST00000420654 287 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 USP9YP18-201ENST00000425912 695 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AL353597.2-202ENST00000434901 373 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 SSXP1-201ENST00000453640 473 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 OR9M1P-201ENST00000459641 921 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 MTND1P16-201ENST00000465177 898 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 RPS27P23-201ENST00000487608 251 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 FAM92A1P2-202ENST00000504766 877 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC090071.1-201ENST00000507713 644 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC098799.2-201ENST00000509466 868 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC048346.1-201ENST00000510247 144 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 RNU6-506P-201ENST00000516553 94 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 IGKV2-36-201ENST00000519999 223 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC008562.1-201ENST00000521763 330 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC068714.1-201ENST00000559623 800 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 MIR4528-201ENST00000577763 90 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 VN1R84P-201ENST00000593697 235 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC020914.4-201ENST00000597690 277 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 VN1R92P-201ENST00000598511 928 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC112220.3-201ENST00000605502 502 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AL158211.4-201ENST00000606988 584 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC103858.2-201ENST00000621471 543 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC039056.2-201ENST00000622261 511 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC015726.3-201ENST00000624501 418 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC099654.14-201ENST00000638599 341 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 AC027290.2-201ENST00000623210 18662 ntBASIC4.22□□□□□ -1.73
EBF3Q9H4W6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
EBF3Q9H4W6 ELF2P3-201ENST00000445099 1506 ntBASIC4.21□□□□□ -1.73
EBF3Q9H4W6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
EBF3Q9H4W6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
EBF3Q9H4W6 AC119744.1-201ENST00000454746 1715 ntBASIC4.21□□□□□ -1.73
EBF3Q9H4W6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 FGF7P2-201ENST00000332473 296 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 RNU6-984P-201ENST00000363236 109 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 Y_RNA.256-201ENST00000364594 104 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 RNU4-91P-201ENST00000364778 135 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 MIR1277-201ENST00000408536 78 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
EBF3Q9H4W6 Z97055.1-201ENST00000419730 712 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 RPL7P30-201ENST00000420888 709 ntBASIC4.21□□□□□ -1.74
EBF3Q9H4W6 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms