Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC096571.1-202ENST00000506634 735 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 TXNP6-201ENST00000510190 310 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 RNU6-276P-201ENST00000516114 96 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 RN7SKP96-201ENST00000516948 297 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC009812.2-201ENST00000517657 457 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 MTND2P26-201ENST00000528255 1029 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC073387.2-201ENST00000604797 784 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 CYCSP41-201ENST00000616920 296 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AL035425.3-201ENST00000564206 4996 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 AC000403.1-201ENST00000613696 3585 ntBASIC3.57□□□□□ -1.84
RNF41Q9H4P4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 RNU1-140P-201ENST00000365040 165 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 SNORA46-201ENST00000384762 135 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 SNORA48.5-201ENST00000391143 135 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 MTCO2P31-201ENST00000402702 684 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC069218.2-201ENST00000411665 344 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC245054.2-201ENST00000415639 319 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AIMP1P1-201ENST00000418670 937 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC008280.1-201ENST00000418851 412 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 MTND2P9-201ENST00000422293 931 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AL513175.1-201ENST00000431492 780 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 MTCYBP42-201ENST00000444653 1130 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC104164.3-201ENST00000467363 1258 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 SNORA74D-201ENST00000516404 141 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 MTCO3P15-201ENST00000526563 574 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 DEFB130C-202ENST00000530001 230 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 EIF5A2P1-201ENST00000564027 460 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 MIR3200-201ENST00000580767 85 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC006254.3-201ENST00000603353 884 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AP005137.2-201ENST00000609238 400 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AP000240.1-201ENST00000609910 452 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AL450489.1-201ENST00000612071 468 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC016597.2-201ENST00000613256 341 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC004943.3-201ENST00000624116 600 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AP001002.2-201ENST00000625137 386 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 OR4G3P-201ENST00000633500 913 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC099654.9-201ENST00000637055 678 ntBASIC3.56□□□□□ -1.84
RNF41Q9H4P4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF41Q9H4P4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 ANKRD36P1-201ENST00000344424 659 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 SNORA70E-201ENST00000384492 135 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 MIR483-201ENST00000385070 76 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC004987.3-201ENST00000413879 771 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 GTF2IP3-201ENST00000433887 494 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC004854.1-201ENST00000440356 349 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 CYCSP32-201ENST00000440548 321 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 RSL24D1P3-201ENST00000449255 495 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 MRPL42P4-201ENST00000453267 443 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 RPS15AP1-201ENST00000457423 391 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 snoU13.7-201ENST00000459220 104 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 RPL23AP62-201ENST00000463396 453 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC011352.3-201ENST00000505162 593 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 RNU6-202P-201ENST00000515998 96 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC107016.2-201ENST00000547968 190 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AL121603.1-201ENST00000553815 142 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 SERPINE4P-201ENST00000554978 281 ntBASIC3.55□□□□□ -1.84
RNF41Q9H4P4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms