Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.95□□□□□ -1.94
TRIM4Q9C037 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.95□□□□□ -1.94
TRIM4Q9C037 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM4Q9C037 OR5BR1P-201ENST00000524992 1330 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM4Q9C037 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM4Q9C037 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM4Q9C037 CKS1BP5-201ENST00000434172 273 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 MED6P1-201ENST00000439659 713 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 UBL5P3-201ENST00000475112 231 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 AC126389.1-201ENST00000477436 290 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 AIG1P1-201ENST00000503376 148 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM4Q9C037 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
TRIM4Q9C037 OR6C73P-201ENST00000546432 358 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 CENPUP2-201ENST00000555897 1186 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 MIR3670-2-201ENST00000582974 65 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 UBL5P2-201ENST00000583788 219 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 MIR3670-1-201ENST00000584160 65 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 MIR3670-3-201ENST00000584855 65 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 AC117490.2-201ENST00000610042 594 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 MIR3670-4-201ENST00000612260 65 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 AC091046.2-201ENST00000620775 665 ntBASIC2.94□□□□□ -1.94
TRIM4Q9C037 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM4Q9C037 METTL21EP-201ENST00000298105 713 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM4Q9C037 RPS3AP26-201ENST00000398259 784 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 RSL24D1P4-201ENST00000400938 484 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 HNRNPDP2-201ENST00000406475 478 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 RPL26P37-201ENST00000411983 438 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 RPS6P14-201ENST00000425165 719 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 RPL23AP33-201ENST00000442301 452 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC009961.3-201ENST00000449832 765 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC108938.1-201ENST00000451204 136 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC027673.1-201ENST00000456245 405 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 RPL21P41-201ENST00000459863 264 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 RN7SL20P-201ENST00000488827 297 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 RPL23AP55-201ENST00000498163 452 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC114781.4-201ENST00000513707 639 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 PSMA2P1-201ENST00000526365 646 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC125611.2-201ENST00000551907 647 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AL392112.1-201ENST00000605115 829 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC002076.2-201ENST00000617362 122 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AL590410.1-201ENST00000617925 333 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM4Q9C037 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM4Q9C037 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.93□□□□□ -1.94
TRIM4Q9C037 AL136520.1-201ENST00000600311 1322 ntBASIC2.93□□□□□ -1.94
TRIM4Q9C037 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM4Q9C037 RNU6-185P-201ENST00000384421 107 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 RPS4XP8-201ENST00000402039 771 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC003685.2-201ENST00000422795 395 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 AL392003.1-201ENST00000434394 243 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 RPL23AP58-201ENST00000440453 469 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 RPL17P49-201ENST00000443728 411 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 HMGB1P26-201ENST00000452520 628 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 C1DP3-201ENST00000455013 423 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 RPS29P26-201ENST00000477483 171 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 RN7SKP132-201ENST00000516001 208 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 OR5G4P-201ENST00000525251 760 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC107016.2-201ENST00000547968 190 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 PRELID3BP8-201ENST00000604148 295 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC073387.2-201ENST00000604797 784 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 AL035413.2-201ENST00000604801 525 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM4Q9C037 AL121594.5-201ENST00000631724 573 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM4Q9C037 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM4Q9C037 AC000403.1-201ENST00000613696 3585 ntBASIC2.92□□□□□ -1.94
TRIM4Q9C037 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM4Q9C037 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TRIM4Q9C037 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms