Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 AC233263.6-201ENST00000631132 1963 ntBASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CHMP4AQ9BY43 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.9□□□□□ -1.62
CHMP4AQ9BY43 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
CHMP4AQ9BY43 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 RPL23AP57-201ENST00000332361 466 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 SNORA40.2-201ENST00000390847 128 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AL592310.1-201ENST00000414330 671 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AL590383.1-201ENST00000428602 75 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC087650.1-201ENST00000431445 468 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 GOT2P5-201ENST00000433995 546 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 NOTCH2P1-201ENST00000443481 624 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 RPS17P13-201ENST00000448974 407 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC104982.1-201ENST00000478775 574 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC108860.1-201ENST00000484521 383 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 RN7SKP31-201ENST00000516354 278 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 SUMO2P20-201ENST00000520803 283 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 MAGOH2P-202ENST00000584384 429 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AL137849.1-201ENST00000604767 169 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AL357080.1-201ENST00000617394 239 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC073530.2-201ENST00000623987 261 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 SNORA50A-202ENST00000629536 136 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 AC092435.3-201ENST00000565538 3654 ntBASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4AQ9BY43 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC009812.4-201ENST00000569134 1805 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 SAR1AP2-201ENST00000392696 594 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL354719.1-201ENST00000406535 843 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL590084.1-201ENST00000407885 387 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 U3.42-201ENST00000408746 214 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 HIGD1AP12-201ENST00000427832 281 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL356867.1-201ENST00000429623 299 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL035246.1-201ENST00000433554 1255 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC122718.1-201ENST00000439448 744 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL592447.1-201ENST00000447592 540 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 NANOGP10-201ENST00000453325 895 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 FAM133DP-201ENST00000464802 691 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AL049829.1-201ENST00000465411 156 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC093752.1-206ENST00000511823 336 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 RNU6-583P-201ENST00000516012 92 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 BNIP3P26-201ENST00000600827 554 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC004853.1-201ENST00000604902 698 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AC106900.2-201ENST00000604994 317 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 BDP1P-201ENST00000582658 1990 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 AP002907.1-201ENST00000606361 1430 ntBASIC4.89□□□□□ -1.63
CHMP4AQ9BY43 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 MIR134-201ENST00000385258 73 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AC007742.1-201ENST00000425789 329 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AL050321.1-201ENST00000432363 400 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 ELOCP26-201ENST00000436067 329 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 RPL26P28-201ENST00000451325 435 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AC084357.1-201ENST00000473404 255 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 KCTD9P5-201ENST00000504141 1170 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 HMGN1P11-201ENST00000508668 303 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 SAP18P1-201ENST00000512058 390 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 HNRNPKP5-201ENST00000515300 253 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AC006960.3-201ENST00000561845 705 ntBASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.88□□□□□ -1.63
CHMP4AQ9BY43 AC087499.8-201ENST00000578406 226 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms