Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AL513185.2-201ENST00000425543 193 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 PSMA6P3-201ENST00000428242 164 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 HMGB3P12-201ENST00000438745 556 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AP1S2P1-201ENST00000457344 379 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 RNU6-420P-201ENST00000458780 107 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AC010326.1-201ENST00000462726 602 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 RN7SL346P-201ENST00000491561 294 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 SCARNA22-201ENST00000503991 125 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 Vault.3-201ENST00000516676 95 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AC123904.2-201ENST00000548059 300 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 HIF1AP1-201ENST00000553642 175 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 SUB1P2-201ENST00000556401 297 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 MIR4697-201ENST00000582977 78 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 BNIP3P10-201ENST00000605360 577 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL136164.3-201ENST00000624429 3978 ntBASIC4.54□□□□□ -1.68
NDC1Q9BTX1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.54□□□□□ -1.68
NDC1Q9BTX1 AL451142.2-201ENST00000429076 2090 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RNU1-32P-201ENST00000363937 159 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 SNORD82-201ENST00000365530 70 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RNU6-116P-201ENST00000384042 109 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 BTBD10P2-201ENST00000404779 676 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC078974.1-201ENST00000411597 223 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AL591848.1-201ENST00000413092 322 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RPS15AP40-201ENST00000419621 391 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 FABP7P1-201ENST00000424004 391 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AL118496.2-201ENST00000448300 230 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RPS20P21-201ENST00000466859 343 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RPL36AP51-201ENST00000487216 318 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC079382.1-201ENST00000493346 557 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC091868.1-201ENST00000508746 304 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 OR5AL2P-201ENST00000532185 920 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 OR8L1P-201ENST00000534005 955 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC024224.1-201ENST00000538284 609 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC099489.2-201ENST00000574976 260 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC090615.1-201ENST00000577519 154 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 MIR4716-201ENST00000579628 84 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC010680.3-201ENST00000604215 520 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC121334.2-201ENST00000605387 271 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 BX664608.1-201ENST00000610519 487 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC093648.1-201ENST00000623546 606 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC005332.5-201ENST00000591222 2919 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC126323.6-202ENST00000568092 3511 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 AC006971.1-201ENST00000407916 4486 ntBASIC4.53□□□□□ -1.68
NDC1Q9BTX1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NDC1Q9BTX1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
NDC1Q9BTX1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
NDC1Q9BTX1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NDC1Q9BTX1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms