Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TAB3P1-202ENST00000452645 1634 ntBASIC4.31□□□□□ -1.72
HERPUD2Q9BSE4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
HERPUD2Q9BSE4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HERPUD2Q9BSE4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.31□□□□□ -1.72
HERPUD2Q9BSE4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.31□□□□□ -1.72
HERPUD2Q9BSE4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 RNU6-660P-201ENST00000364566 109 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC011742.1-201ENST00000431448 434 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 UBE2D3P1-201ENST00000436669 444 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 THAP5P1-201ENST00000439089 262 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC104308.1-201ENST00000454621 333 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 OR6K1P-201ENST00000456766 971 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 UBDP1-202ENST00000457888 382 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 RPS26P3-201ENST00000470205 348 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 BZW1P2-201ENST00000473537 826 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC090543.2-201ENST00000483963 348 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC004057.1-201ENST00000485827 348 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 RPS26P15-201ENST00000488067 348 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL139099.1-201ENST00000497398 403 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC021678.1-201ENST00000505195 936 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL592156.1-201ENST00000508758 304 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 MTND1P22-201ENST00000510572 951 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC108043.1-201ENST00000512696 574 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC022483.1-201ENST00000514020 567 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC026801.2-201ENST00000515352 425 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 RNU6-232P-201ENST00000517144 64 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC090281.1-201ENST00000523019 276 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AP001004.1-201ENST00000582468 324 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AC004223.4-201ENST00000612426 332 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 MIR7151-201ENST00000617477 60 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL731566.2-201ENST00000618971 317 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL161637.1-201ENST00000622380 412 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 AL356121.2-201ENST00000624715 780 ntBASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
HERPUD2Q9BSE4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 U3.20-201ENST00000390909 217 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AL136372.1-201ENST00000403060 228 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 SNORA3C-201ENST00000408792 125 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 RNA5SP104-201ENST00000410989 118 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC092647.1-201ENST00000420654 287 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 NANOGP6-201ENST00000429190 847 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 OR4K11P-201ENST00000431829 904 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 RSU1P2-202ENST00000437884 485 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC091862.1-201ENST00000438016 1100 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC006011.1-201ENST00000442758 349 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC091564.1-201ENST00000464563 479 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC010618.1-201ENST00000469924 477 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC010486.2-201ENST00000505572 483 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 HMGB3P15-201ENST00000507326 574 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 IGKV2-38-201ENST00000517443 247 ntBASIC4.29□□□□□ -1.72
HERPUD2Q9BSE4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms