Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AP003973.1-201ENST00000604639 691 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AL450336.1-201ENST00000605180 586 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AL451086.1-201ENST00000605596 223 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC100793.4-201ENST00000613683 429 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC009159.2-201ENST00000617603 606 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC123767.1-202ENST00000620407 817 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC087821.2-201ENST00000637086 450 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 MFSD8-245ENST00000641743 948 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AC009093.8-201ENST00000641769 292 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AL359893.1-201ENST00000447628 1580 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 AL353743.1-202ENST00000431724 1695 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 ZNF285B-201ENST00000561698 1767 ntBASIC3.07□□□□□ -1.92
EBF4Q9BQW3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
EBF4Q9BQW3 SAGE4P-201ENST00000442271 3381 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 RNA5SP124-201ENST00000362739 110 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 RNU6-115P-201ENST00000364310 107 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL359837.1-201ENST00000381357 287 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 Y_RNA.472-201ENST00000384322 102 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AP000567.1-201ENST00000406413 156 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL133264.1-201ENST00000407157 562 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 VN1R51P-201ENST00000411675 945 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 VPS26BP1-201ENST00000417155 755 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 BOLA3P4-201ENST00000418151 400 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 MTND2P16-201ENST00000419987 799 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 C4BPAP2-201ENST00000428434 478 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 PSMA2P3-201ENST00000429685 675 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL445584.1-201ENST00000431451 330 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC005345.1-201ENST00000431868 217 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 CKS1BP5-201ENST00000434172 273 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 RPL23AP33-201ENST00000442301 452 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC239367.2-201ENST00000447309 705 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 HMGN2P21-201ENST00000447764 270 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC079776.3-201ENST00000450665 370 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC009220.1-201ENST00000451614 275 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL136126.1-201ENST00000473603 402 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC020699.1-201ENST00000505161 445 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC005921.1-201ENST00000510589 286 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 RN7SKP265-201ENST00000516448 223 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 IGKV2D-36-201ENST00000518643 226 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 OR8K4P-201ENST00000534608 872 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC074051.3-201ENST00000570238 358 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC005412.1-201ENST00000580812 1049 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 MIR4276-201ENST00000584832 70 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL357094.1-201ENST00000603845 844 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC016877.3-201ENST00000606778 504 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL157817.1-201ENST00000614264 790 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AL157770.1-201ENST00000623049 439 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 MIR4496-201ENST00000635896 61 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 AC068620.4-201ENST00000636730 1182 ntBASIC3.06□□□□□ -1.92
EBF4Q9BQW3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
EBF4Q9BQW3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 AL355578.1-201ENST00000607405 1328 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 RNU1-85P-201ENST00000364127 164 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 RNU4-51P-201ENST00000364206 140 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
EBF4Q9BQW3 MIR649-201ENST00000384843 97 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 SNORD65.1-201ENST00000390889 71 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 RNU6-1242P-201ENST00000391052 103 ntBASIC3.05□□□□□ -1.92
EBF4Q9BQW3 HMGN1P24-201ENST00000412282 298 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms