Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC007656.2-201ENST00000624902 4547 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CPNE1Q99829 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.62□□□□□ -1.83
CPNE1Q99829 RNA5SP189-201ENST00000364920 115 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 SNORA56-201ENST00000383966 129 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AL031679.1-201ENST00000400616 525 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AL138880.1-201ENST00000405824 642 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 U3.39-201ENST00000408569 239 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 TPMTP2-201ENST00000414372 726 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 MTCO2P5-201ENST00000422621 426 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CPNE1Q99829 AL590233.1-201ENST00000430017 456 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AL158071.1-201ENST00000430315 461 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 OR4C10P-201ENST00000434991 931 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC084357.1-201ENST00000473404 255 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 FAM172BP-201ENST00000487497 1089 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AC021146.5-201ENST00000503544 545 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.62□□□□□ -1.83
CPNE1Q99829 RNU2-27P-201ENST00000516185 142 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 RNA5SP309-201ENST00000516670 106 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AP006245.1-201ENST00000522549 120 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AP004242.1-201ENST00000533701 349 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.62□□□□□ -1.83
CPNE1Q99829 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AL158211.1-201ENST00000566763 763 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC006077.1-201ENST00000604746 343 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AC011816.2-201ENST00000607089 556 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CPNE1Q99829 MIR6758-201ENST00000620653 63 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AL354798.1-201ENST00000622505 329 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AC007490.1-201ENST00000624321 703 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.62□□□□□ -1.83
CPNE1Q99829 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.62□□□□□ -1.83
CPNE1Q99829 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPNE1Q99829 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CPNE1Q99829 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPNE1Q99829 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.61□□□□□ -1.83
CPNE1Q99829 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPNE1Q99829 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RPL32P3-201ENST00000359025 275 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 SNORA31-201ENST00000362607 130 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RNA5SP283-201ENST00000365604 119 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPNE1Q99829 RNU6-629P-201ENST00000384061 103 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RSL24D1P4-201ENST00000400938 484 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AL049693.1-201ENST00000402760 611 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RPS7P15-201ENST00000415804 584 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 AL139247.1-201ENST00000422768 325 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.61□□□□□ -1.83
CPNE1Q99829 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.61□□□□□ -1.83
CPNE1Q99829 EZH2P1-201ENST00000431167 291 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 BMS1P19-201ENST00000433925 393 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.61□□□□□ -1.83
CPNE1Q99829 MTCYBP34-201ENST00000439552 670 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 Z95327.1-201ENST00000446082 482 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 BTF3P5-201ENST00000457252 467 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AP001992.1-205ENST00000462248 379 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 NDUFA5P9-201ENST00000472609 340 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RNU6-150P-201ENST00000516237 95 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 RN7SKP60-201ENST00000516985 239 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CPNE1Q99829 AP003461.1-201ENST00000528866 78 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 LRRC34P1-201ENST00000542742 915 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.61□□□□□ -1.83
CPNE1Q99829 AL121603.1-201ENST00000553815 142 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 TGIF1P1-201ENST00000558095 802 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.61□□□□□ -1.83
CPNE1Q99829 AC012182.1-201ENST00000570133 895 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AL136981.2-201ENST00000617319 734 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 AL357080.1-201ENST00000617394 239 ntBASIC3.61□□□□□ -1.83
CPNE1Q99829 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.61□□□□□ -1.83
CPNE1Q99829 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.61□□□□□ -1.83
CPNE1Q99829 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPNE1Q99829 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms