Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AP001269.3-201ENST00000588718 329 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 GAS5-AS1-201ENST00000602767 694 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC013244.3-201ENST00000605614 388 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC069545.1-201ENST00000605671 358 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 MIR7851-201ENST00000610611 160 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC022509.4-201ENST00000621404 572 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC048347.1-201ENST00000624621 427 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NEK1Q96PY6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 MTND5P3-201ENST00000438536 1800 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 MTND5P31-201ENST00000419366 1374 ntBASIC4.11□□□□□ -1.75
NEK1Q96PY6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.11□□□□□ -1.75
NEK1Q96PY6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NEK1Q96PY6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 SNORA31-201ENST00000362607 130 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 SNORD116.1-201ENST00000365628 92 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 RNVU1-14-201ENST00000384770 164 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 MIR218-2-201ENST00000385006 110 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 RPL23AP47-201ENST00000408017 460 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 RNU2-42P-201ENST00000410697 113 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 AC073264.1-201ENST00000411508 416 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 AL161449.1-201ENST00000414531 1199 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 AC007390.1-201ENST00000415722 356 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 MTCO3P1-205ENST00000422088 832 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 B3GNT2P1-201ENST00000434960 952 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 CR769776.1-201ENST00000441254 787 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NEK1Q96PY6 MRPS31P2-201ENST00000451581 518 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 USP9YP25-201ENST00000457708 443 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 PNPLA4P1-201ENST00000458328 305 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 AC092954.1-201ENST00000609121 445 ntBASIC4.1□□□□□ -1.75
NEK1Q96PY6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK1Q96PY6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NEK1Q96PY6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK1Q96PY6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NEK1Q96PY6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NEK1Q96PY6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEK1Q96PY6 AL513302.2-201ENST00000562313 1842 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEK1Q96PY6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEK1Q96PY6 RNU4-92P-201ENST00000363783 136 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 RNA5SP189-201ENST00000364920 115 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 MIR513B-201ENST00000385136 84 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 ERHP2-201ENST00000402323 299 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC245052.5-201ENST00000416320 649 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC096632.1-201ENST00000427395 310 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC005345.1-201ENST00000431868 217 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AL159987.2-201ENST00000432754 307 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK1Q96PY6 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 RPL12P26-201ENST00000452430 487 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 RBMY2UP-201ENST00000453474 324 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 SNORD11.1-201ENST00000459482 85 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC011979.1-201ENST00000472300 483 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AL049830.2-201ENST00000480072 201 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 BOLA3P3-201ENST00000505182 232 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC104057.1-201ENST00000515547 497 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 SNORA48.10-201ENST00000516965 160 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.09□□□□□ -1.75
NEK1Q96PY6 HIGD1AP10-201ENST00000527837 282 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NEK1Q96PY6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.09□□□□□ -1.75
NEK1Q96PY6 SNORD39.3-201ENST00000584451 71 ntBASIC4.09□□□□□ -1.75
NEK1Q96PY6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.09□□□□□ -1.75
NEK1Q96PY6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEK1Q96PY6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.09□□□□□ -1.75
NEK1Q96PY6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NEK1Q96PY6 AL645937.1-201ENST00000641739 1652 ntBASIC4.09□□□□□ -1.76
NEK1Q96PY6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
NEK1Q96PY6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NEK1Q96PY6 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
NEK1Q96PY6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.08□□□□□ -1.76
NEK1Q96PY6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.08□□□□□ -1.76
NEK1Q96PY6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NEK1Q96PY6 MIR30E-201ENST00000362104 92 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms