Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 TAB3P1-202ENST00000452645 1634 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC42Q96M95 SNORA18.3-201ENST00000384122 132 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 RNU6-98P-201ENST00000384173 107 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 AL024507.1-201ENST00000412741 274 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 RAD23BP2-201ENST00000416003 1207 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 YPEL5P1-201ENST00000419731 367 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 RPL21P133-201ENST00000443666 476 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 AC009961.3-201ENST00000449832 765 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 AIG1P1-201ENST00000503376 148 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 PCNAP1-201ENST00000505363 709 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 AC025881.1-201ENST00000518851 512 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 AC138761.3-201ENST00000579993 334 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 AC060766.3-201ENST00000591442 263 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 AL160237.3-201ENST00000604114 1013 ntBASIC2.84□□□□□ -1.95
CCDC42Q96M95 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC42Q96M95 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.84□□□□□ -1.96
CCDC42Q96M95 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
CCDC42Q96M95 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC42Q96M95 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC42Q96M95 METTL21EP-201ENST00000298105 713 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 DEFA7P-201ENST00000382676 285 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 UBA52P6-201ENST00000399822 382 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 CACYBPP2-201ENST00000453625 678 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 AC010285.1-201ENST00000470580 392 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 AC126182.1-201ENST00000478134 357 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 HIGD1AP13-201ENST00000509878 289 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 MIR4429-201ENST00000580105 73 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 NTAN1P1-201ENST00000603150 646 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 AC073387.2-201ENST00000604797 784 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 AL162274.2-201ENST00000614406 332 ntBASIC2.83□□□□□ -1.96
CCDC42Q96M95 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC42Q96M95 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC42Q96M95 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC42Q96M95 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC42Q96M95 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC42Q96M95 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 OR5H2-201ENST00000355273 945 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 RNU1-112P-201ENST00000364401 164 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 RNU1-140P-201ENST00000365040 165 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC42Q96M95 OR52E6-202ENST00000379946 954 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 MIR142-201ENST00000384835 87 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 PRRC2CP1-201ENST00000404428 159 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC092638.1-201ENST00000411966 1275 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC127537.2-201ENST00000439258 465 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC011816.1-201ENST00000441346 546 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC027673.1-201ENST00000456245 405 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 snoU13.3-201ENST00000459441 104 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 RPL7P49-201ENST00000471402 708 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC010301.1-201ENST00000473936 355 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC42Q96M95 SNORA31.15-201ENST00000516771 132 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 RN7SKP96-201ENST00000516948 297 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 HMGB1P23-201ENST00000518743 568 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC090136.1-201ENST00000520009 240 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC022080.3-201ENST00000544433 482 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 CYCSP39-201ENST00000565821 309 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC107954.1-201ENST00000565906 727 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 MIR5092-201ENST00000583139 88 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 SRGNP1-201ENST00000603392 451 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AL159169.3-201ENST00000608871 561 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC110792.4-201ENST00000609843 298 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC091046.2-201ENST00000620775 665 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 MIR8057-201ENST00000620957 69 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC006249.1-201ENST00000621223 471 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC244100.1-202ENST00000621554 382 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AC090897.3-201ENST00000636973 1157 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 OR8B1P-202ENST00000641132 1178 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AL645568.2-201ENST00000432815 1337 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 AL359893.1-201ENST00000447628 1580 ntBASIC2.82□□□□□ -1.96
CCDC42Q96M95 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC42Q96M95 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms