Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AL831737.1-201ENST00000441288 271 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX27Q96L92 MTND1P29-201ENST00000448112 647 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX27Q96L92 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AL358832.1-201ENST00000497800 389 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC010460.1-201ENST00000507087 466 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC092851.1-201ENST00000535964 478 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX27Q96L92 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AC141257.3-201ENST00000572906 215 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX27Q96L92 MIR4458-201ENST00000578872 75 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 U73023.1-201ENST00000603134 700 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AL031775.1-201ENST00000607014 887 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC080013.4-201ENST00000607624 649 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AL391497.1-201ENST00000608671 547 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC011939.3-201ENST00000613686 466 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX27Q96L92 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX27Q96L92 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AC087190.4-201ENST00000574616 8334 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AL022578.1-201ENST00000439330 1433 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX27Q96L92 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 AL592437.2-201ENST00000421655 2434 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.55□□□□□ -1.68
SNX27Q96L92 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SNX27Q96L92 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 RPL23AP57-201ENST00000332361 466 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 Y_RNA.201-201ENST00000364052 96 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 SNORD82-201ENST00000365530 70 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 Y_RNA.436-201ENST00000384097 102 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 RNU6-952P-201ENST00000391164 108 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 MTND4LP20-201ENST00000402379 270 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 TPMTP2-201ENST00000414372 726 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AL356095.1-201ENST00000417217 199 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AL161631.1-201ENST00000417933 486 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 RBMY1KP-201ENST00000423480 476 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC091286.1-201ENST00000431233 461 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX27Q96L92 LARP1BP3-201ENST00000437229 869 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 RPL23AP46-201ENST00000438548 490 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AL512286.1-201ENST00000439244 400 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 TAF9P1-201ENST00000445421 515 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AL360221.1-201ENST00000445989 335 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 RPL5P32-201ENST00000454085 879 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 TAF9P2-201ENST00000454958 515 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AF213884.1-201ENST00000488102 463 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC108145.1-201ENST00000503770 153 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 RNA5SP154-201ENST00000516193 111 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AC022861.1-201ENST00000522981 663 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 PHBP17-201ENST00000528576 541 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AC023161.2-201ENST00000551218 780 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX27Q96L92 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX27Q96L92 PCMTD1P2-201ENST00000565017 355 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC022655.2-201ENST00000577280 318 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 MIR3945-201ENST00000581853 98 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AP001004.1-201ENST00000582468 324 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.55□□□□□ -1.68
SNX27Q96L92 AC008638.3-201ENST00000603341 463 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 MIR6867-201ENST00000610636 67 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 AL121772.2-201ENST00000614331 297 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SNX27Q96L92 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SNX27Q96L92 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNX27Q96L92 AL133412.1-201ENST00000380194 2992 ntBASIC4.55□□□□□ -1.68
SNX27Q96L92 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 619.2 ms