Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.2□□□□□ -1.58
SHDQ96IW2 AL353621.2-201ENST00000605340 133 ntBASIC5.2□□□□□ -1.58
SHDQ96IW2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.2□□□□□ -1.58
SHDQ96IW2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.2□□□□□ -1.58
SHDQ96IW2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.2□□□□□ -1.58
SHDQ96IW2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.2□□□□□ -1.58
SHDQ96IW2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHDQ96IW2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHDQ96IW2 AL049555.1-201ENST00000562834 1933 ntBASIC5.2□□□□□ -1.58
SHDQ96IW2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHDQ96IW2 AL034549.2-201ENST00000618285 3373 ntBASIC5.2□□□□□ -1.58
SHDQ96IW2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.2□□□□□ -1.58
SHDQ96IW2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.2□□□□□ -1.58
SHDQ96IW2 AC108467.2-201ENST00000617640 1597 ntBASIC5.2□□□□□ -1.58
SHDQ96IW2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHDQ96IW2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHDQ96IW2 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHDQ96IW2 AC026523.2-201ENST00000625039 7739 ntBASIC5.2□□□□□ -1.58
SHDQ96IW2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
SHDQ96IW2 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.2□□□□□ -1.58
SHDQ96IW2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.2□□□□□ -1.58
SHDQ96IW2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 MTND5P17-201ENST00000418405 1603 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.19□□□□□ -1.58
SHDQ96IW2 AC022893.2-201ENST00000564832 3296 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
SHDQ96IW2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.19□□□□□ -1.58
SHDQ96IW2 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 AC126755.2-208ENST00000327792 462 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AC138969.1-213ENST00000331436 462 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 RPL7P26-201ENST00000333817 754 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 Y_RNA.142-201ENST00000363491 102 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 RN7SKP227-201ENST00000364445 330 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 RNU4-65P-201ENST00000410473 140 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 RNU4-78P-201ENST00000410940 126 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 RN7SKP100-201ENST00000411258 284 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 RNA5SP107-201ENST00000411358 122 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 EEF1A1P40-201ENST00000412883 573 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.19□□□□□ -1.58
SHDQ96IW2 BEND7P1-201ENST00000422058 457 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHDQ96IW2 AC010326.1-201ENST00000462726 602 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.19□□□□□ -1.58
SHDQ96IW2 AC103987.1-201ENST00000473394 348 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AC026979.1-201ENST00000492525 396 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 RNU6-64P-201ENST00000517119 105 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 AC022690.1-201ENST00000526681 550 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 DEFB108D-201ENST00000527787 222 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.19□□□□□ -1.58
SHDQ96IW2 ARL2BPP2-201ENST00000550907 489 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AC068831.4-201ENST00000556118 109 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 AL356055.1-201ENST00000602528 446 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AL121992.2-201ENST00000606262 256 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.19□□□□□ -1.58
SHDQ96IW2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.19□□□□□ -1.58
SHDQ96IW2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 AL359955.1-201ENST00000455242 3275 ntBASIC5.19□□□□□ -1.58
SHDQ96IW2 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHDQ96IW2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.18□□□□□ -1.58
SHDQ96IW2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SHDQ96IW2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SHDQ96IW2 AC099654.2-201ENST00000433031 1980 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHDQ96IW2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
SHDQ96IW2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.18□□□□□ -1.58
SHDQ96IW2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHDQ96IW2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SHDQ96IW2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHDQ96IW2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHDQ96IW2 SAMMSON-226ENST00000642089 1582 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHDQ96IW2 Y_RNA.22-201ENST00000362492 102 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 RNU6-845P-201ENST00000362578 103 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 RNU6-263P-201ENST00000363811 107 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 RN7SKP224-201ENST00000364140 325 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 Y_RNA.356-201ENST00000365475 113 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 AC068538.1-201ENST00000376856 336 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 RNA5SP332-201ENST00000391063 115 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.18□□□□□ -1.58
SHDQ96IW2 RN7SKP159-201ENST00000410657 292 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.18□□□□□ -1.58
SHDQ96IW2 AC092447.6-201ENST00000414578 210 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.18□□□□□ -1.58
SHDQ96IW2 RPL36AP53-201ENST00000432891 316 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 AMD1P1-201ENST00000457220 922 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 EIF4EP3-201ENST00000498782 656 ntBASIC5.18□□□□□ -1.58
SHDQ96IW2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms