Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 MAPK10-323ENST00000641493 3207 ntBASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 MAPK10-270ENST00000641102 3538 ntBASIC6.58□□□□□ -1.36
MS4A3Q96HJ5 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 MIR494-201ENST00000349529 81 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 RNU6-1113P-201ENST00000384348 107 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC109638.1-201ENST00000417406 326 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 OR7E62P-201ENST00000456741 477 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 GLRXP3-201ENST00000470810 321 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 MRPL49P1-201ENST00000505951 535 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC005518.2-201ENST00000603254 282 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC024581.2-201ENST00000619986 252 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 LPAL2-203ENST00000454031 2498 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 MTND5P18-201ENST00000445624 1801 ntBASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MS4A3Q96HJ5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RNU6-324P-201ENST00000363957 106 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 SNORA51.7-201ENST00000384171 134 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RNU6-440P-201ENST00000390882 105 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 PTMAP8-201ENST00000397729 342 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RNU2-5P-201ENST00000410533 180 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 ELOCP21-201ENST00000412558 336 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC112220.1-201ENST00000434628 355 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC112498.1-201ENST00000444401 332 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC108161.1-201ENST00000461060 402 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RPL30P12-201ENST00000474666 353 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RN7SL332P-201ENST00000482163 254 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 MRPS36P2-201ENST00000512569 299 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC138866.1-201ENST00000514522 497 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 IGLVI-42-201ENST00000522485 381 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RN7SL697P-201ENST00000582484 299 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC099669.2-201ENST00000616549 437 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC073488.8-201ENST00000631952 757 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 MIR3202-2-201ENST00000635980 79 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
MS4A3Q96HJ5 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms