Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AL359212.1-201ENST00000556608 614 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 BNIP3P5-201ENST00000562290 498 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AP001004.1-201ENST00000582468 324 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC103710.1-201ENST00000610003 901 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AP001506.1-201ENST00000615444 211 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 AC006504.8-201ENST00000621046 635 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHFRQ96EP1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 MAPK10-349ENST00000641767 3661 ntBASIC4.69□□□□□ -1.66
CHFRQ96EP1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHFRQ96EP1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.69□□□□□ -1.66
CHFRQ96EP1 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHFRQ96EP1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHFRQ96EP1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHFRQ96EP1 RNU6-543P-201ENST00000362576 108 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 Y_RNA.72-201ENST00000362894 103 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 RNU6-1160P-201ENST00000384546 104 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 MIR142-201ENST00000384835 87 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AP000357.1-201ENST00000409926 1165 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 JKAMPP1-201ENST00000413804 919 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 NCOR1P3-201ENST00000420479 303 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 RPL36AP10-201ENST00000421785 322 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 NUP35P1-201ENST00000422734 947 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 RPS24P8-201ENST00000431490 402 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHFRQ96EP1 ARPC3P5-201ENST00000448802 534 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC140076.1-201ENST00000449897 361 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 SNRPGP6-201ENST00000451124 220 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC026412.2-201ENST00000512270 1075 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 RN7SKP13-201ENST00000515933 244 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC105029.1-201ENST00000520250 669 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 OR6C73P-201ENST00000546432 358 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC025884.1-201ENST00000556034 378 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 NIFKP8-201ENST00000560500 874 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC007224.1-201ENST00000564410 144 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC137800.2-201ENST00000574375 120 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 VN1R80P-201ENST00000597126 338 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC006006.1-201ENST00000603082 144 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AL442067.1-201ENST00000613261 223 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC011815.3-201ENST00000624194 473 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 AC024023.1-201ENST00000624530 922 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 MAPK10-320ENST00000641462 6696 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.68□□□□□ -1.66
CHFRQ96EP1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHFRQ96EP1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CHFRQ96EP1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHFRQ96EP1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 RNU6-574P-201ENST00000384265 107 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 SNORA37-201ENST00000384504 129 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 SNORA57.1-201ENST00000391227 145 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 RPS24P12-201ENST00000402084 394 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL139095.3-201ENST00000419672 1203 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC093698.1-201ENST00000423843 571 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL035410.1-201ENST00000427409 427 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 RPS27AP12-201ENST00000429552 465 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 SEPT7P5-201ENST00000434048 306 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 RPS26P30-201ENST00000443431 335 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 NUTF2P3-201ENST00000448540 384 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 SNRPFP4-201ENST00000456366 242 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 snoU109.1-201ENST00000459339 135 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC023598.1-201ENST00000472521 361 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 GAPDHP39-201ENST00000481866 979 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 SNX5P1-201ENST00000505757 1041 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC098799.3-201ENST00000506095 438 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC010486.1-201ENST00000511793 424 ntBASIC4.67□□□□□ -1.66
CHFRQ96EP1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.67□□□□□ -1.66
CHFRQ96EP1 RNU6-277P-201ENST00000516272 106 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms