Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.234-201ENST00000364409 97 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 RN7SKP227-201ENST00000364445 330 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 SNORA40.3-201ENST00000390964 122 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 RNU6-821P-201ENST00000390995 107 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.72□□□□□ -1.65
HPS3Q969F9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS3Q969F9 RPS23P10-201ENST00000416185 486 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 NANOGP6-201ENST00000429190 847 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC011998.1-201ENST00000433403 117 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 MTCYBP45-201ENST00000435243 565 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS3Q969F9 FAM103A2P-201ENST00000444122 354 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.72□□□□□ -1.65
HPS3Q969F9 Z82190.1-201ENST00000454534 490 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 FGF7P3-201ENST00000454645 303 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 SNORD42A-201ENST00000459584 64 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 RN7SL810P-201ENST00000493031 276 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC006390.1-201ENST00000508068 283 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC109464.2-201ENST00000510242 943 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 CDC42P4-201ENST00000510507 563 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 RNA5SP49-201ENST00000516450 115 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AP003033.1-201ENST00000527244 415 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AL391156.1-201ENST00000554965 554 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 ZNF519P3-201ENST00000557158 1032 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC107954.1-201ENST00000565906 727 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AL121834.1-201ENST00000572284 509 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AL669831.4-202ENST00000590817 238 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC112191.3-201ENST00000604371 277 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC064801.1-201ENST00000612025 407 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 AC015540.1-201ENST00000615828 501 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AC091925.2-201ENST00000625059 256 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HPS3Q969F9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HPS3Q969F9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.72□□□□□ -1.65
HPS3Q969F9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HPS3Q969F9 CCT4P2-201ENST00000233836 1548 ntBASIC4.72□□□□□ -1.65
HPS3Q969F9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HPS3Q969F9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS3Q969F9 SNORD51-201ENST00000384320 80 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 RNA5SP56-201ENST00000410277 118 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS3Q969F9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS3Q969F9 AL161631.1-201ENST00000417933 486 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS3Q969F9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS3Q969F9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS3Q969F9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 EZH2P1-201ENST00000431167 291 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 RPS24P1-201ENST00000438550 371 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS3Q969F9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HPS3Q969F9 RPS20P32-201ENST00000456044 356 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC099563.1-201ENST00000456086 418 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 ST13P14-201ENST00000474095 734 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC041039.1-201ENST00000485656 536 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 LARP1BP2-201ENST00000486594 519 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC026979.1-201ENST00000492525 396 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.71□□□□□ -1.66
HPS3Q969F9 TMEM248P1-201ENST00000510579 951 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 PPBPP1-201ENST00000510807 373 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 RNU6-714P-201ENST00000516963 103 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 RNU6-1003P-201ENST00000517099 105 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS3Q969F9 OR4P1P-201ENST00000530808 1136 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS3Q969F9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 EEF1B2P4-201ENST00000551398 348 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.71□□□□□ -1.66
HPS3Q969F9 MIR4277-201ENST00000578298 84 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 AC026368.1-201ENST00000614934 690 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AC040168.1-201ENST00000623594 991 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AL603839.4-201ENST00000624658 1005 ntBASIC4.71□□□□□ -1.66
HPS3Q969F9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HPS3Q969F9 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.71□□□□□ -1.66
HPS3Q969F9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.71□□□□□ -1.66
HPS3Q969F9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms