Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL121657.1-201ENST00000327215 531 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 RNU6-925P-201ENST00000384629 104 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 MIR122-201ENST00000385044 85 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 MIR493-201ENST00000385254 89 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 DHFRP6-201ENST00000401776 268 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL022722.2-201ENST00000402519 180 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 HSPE1P8-201ENST00000406997 288 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 RN7SKP285-201ENST00000410137 318 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL592310.1-201ENST00000414330 671 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 TPMTP2-201ENST00000414372 726 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTP4A1Q93096 USP9YP36-201ENST00000424581 829 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 MTATP6P4-201ENST00000427725 675 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 TXNP1-201ENST00000441872 371 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL590664.1-201ENST00000448065 339 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 DNAJC19P1-201ENST00000455312 319 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 TRBV12-2-201ENST00000489763 344 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 RPL7P23-201ENST00000493874 747 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTP4A1Q93096 RNA5SP179-201ENST00000517284 121 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PTP4A1Q93096 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL139022.2-201ENST00000606934 443 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 AL451074.6-201ENST00000608512 729 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
PTP4A1Q93096 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PTP4A1Q93096 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.48□□□□□ -1.85
PTP4A1Q93096 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC005832.2-201ENST00000538921 1430 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 SNORA70.2-201ENST00000364506 135 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 Y_RNA.311-201ENST00000365068 96 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC068538.1-201ENST00000376856 336 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 MIR135A2-201ENST00000384854 100 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 MIR184-201ENST00000384962 84 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 SKINT1L-201ENST00000401057 817 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 AL354719.1-201ENST00000406535 843 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 U3.42-201ENST00000408746 214 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 NANOGP2-201ENST00000435391 727 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 RN7SL385P-201ENST00000468873 276 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 RPL32P34-201ENST00000486380 400 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC006499.2-201ENST00000513470 337 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 NDUFA5P2-201ENST00000519723 344 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AL390208.1-201ENST00000605885 644 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC091905.1-201ENST00000624400 311 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTP4A1Q93096 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PTP4A1Q93096 AC009812.4-201ENST00000569134 1805 ntBASIC3.47□□□□□ -1.85
PTP4A1Q93096 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PTP4A1Q93096 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.85
PTP4A1Q93096 ZNF542P-204ENST00000482727 1305 ntBASIC3.46□□□□□ -1.85
PTP4A1Q93096 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTP4A1Q93096 AC010733.2-201ENST00000589496 5702 ntBASIC3.46□□□□□ -1.86
PTP4A1Q93096 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTP4A1Q93096 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTP4A1Q93096 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PTP4A1Q93096 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTP4A1Q93096 RNA5SP130-201ENST00000364431 114 ntBASIC3.46□□□□□ -1.86
PTP4A1Q93096 AL356095.1-201ENST00000417217 199 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms