Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-1263P-201ENST00000384601 106 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL353729.1-201ENST00000425044 720 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC003982.1-202ENST00000469928 248 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC092436.1-201ENST00000506450 503 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 LTV1P1-201ENST00000510683 1237 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC005351.1-201ENST00000511152 786 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AP004242.1-201ENST00000533701 349 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC090953.1-201ENST00000604305 1092 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RNA5SP295-201ENST00000362655 121 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 SNORA70E-201ENST00000384492 135 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC092013.1-201ENST00000438795 332 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 TRBV8-1-201ENST00000481590 279 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 THAP6-203ENST00000502620 582 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 HPRT1P3-201ENST00000539521 576 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.295-201ENST00000364918 102 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 MIR27B-201ENST00000385129 97 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC107081.1-201ENST00000414975 361 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 EI24P1-201ENST00000416584 867 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 HMGB1P15-201ENST00000453854 435 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC114982.2-201ENST00000461396 358 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC096725.1-201ENST00000514266 313 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RN7SKP34-201ENST00000516142 244 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.670-201ENST00000516255 105 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 C1GALT1P1-201ENST00000548895 1089 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL137014.1-201ENST00000420490 1226 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 BTG3P1-201ENST00000435859 716 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 IFNWP4-201ENST00000453148 294 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RPS15AP1-201ENST00000457423 391 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 IGHV3-76-201ENST00000522465 295 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC006116.7-201ENST00000590141 756 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL356321.1-201ENST00000621360 228 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC005539.1-201ENST00000443768 1479 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RNU2-37P-201ENST00000410695 177 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 MRPS18BP2-201ENST00000434310 759 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 UQCRHP3-201ENST00000451503 251 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC243772.1-201ENST00000451620 410 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RPL7P5-201ENST00000471472 736 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 SNORA31.21-201ENST00000517180 77 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 TRAV37-201ENST00000553906 342 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC009977.1-201ENST00000586015 570 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC034236.3-201ENST00000605999 461 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 U6.98-201ENST00000637157 84 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RNA5SP239-201ENST00000410218 129 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RNU6-321P-201ENST00000410912 106 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RPL9P6-201ENST00000492764 598 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC114967.1-201ENST00000504890 259 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC116337.1-201ENST00000509680 687 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AP000790.1-201ENST00000528891 737 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC107294.3-201ENST00000609211 526 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 METTL8-218ENST00000638989 876 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 METTL8-219ENST00000640734 726 ntTSL 2 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 MTND5P27-201ENST00000428871 1720 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 RNU6-603P-201ENST00000411403 107 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC093151.1-201ENST00000427711 313 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AP000926.1-201ENST00000479573 241 ntBASIC0.78□□□□□ -2.28
SYNE1Q8NF91 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC0.78□□□□□ -2.28
SYNE1Q8NF91 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms