Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 Z99129.2-201ENST00000619967 314 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.4□□□□□ -1.71
USP38Q8NB14 CYP3A51P-201ENST00000633513 256 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
USP38Q8NB14 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.4□□□□□ -1.71
USP38Q8NB14 ZNF734P-201ENST00000419494 1534 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP38Q8NB14 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.4□□□□□ -1.71
USP38Q8NB14 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP38Q8NB14 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP38Q8NB14 AL079343.1-201ENST00000572358 1771 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 AC004944.1-201ENST00000517807 3059 ntBASIC4.4□□□□□ -1.71
USP38Q8NB14 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP38Q8NB14 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP38Q8NB14 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP38Q8NB14 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP38Q8NB14 NMD3P1-201ENST00000439704 1488 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 MTND2P18-201ENST00000419962 1030 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.39□□□□□ -1.71
USP38Q8NB14 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 AC127537.2-201ENST00000439258 465 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.39□□□□□ -1.71
USP38Q8NB14 SETD6P1-201ENST00000444575 317 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 RPS11P1-201ENST00000451072 473 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 FABP3P2-201ENST00000453169 399 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 AC026410.2-201ENST00000460281 156 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 RN7SL323P-201ENST00000494712 295 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 RPL31P61-201ENST00000496160 376 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 TMEM251P1-201ENST00000503717 318 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 AC109458.1-201ENST00000508858 316 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.39□□□□□ -1.71
USP38Q8NB14 MTCO3P44-201ENST00000510977 541 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 PTGES3P3-201ENST00000511479 482 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 MTCYBP43-201ENST00000513621 740 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.39□□□□□ -1.71
USP38Q8NB14 AC007834.2-201ENST00000536310 343 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.39□□□□□ -1.71
USP38Q8NB14 OSBPL9P5-201ENST00000542581 171 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.39□□□□□ -1.71
USP38Q8NB14 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.39□□□□□ -1.71
USP38Q8NB14 VIS1.1-201ENST00000610517 203 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 GDI2P1-201ENST00000429312 1336 ntBASIC4.39□□□□□ -1.71
USP38Q8NB14 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP38Q8NB14 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
USP38Q8NB14 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP38Q8NB14 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.38□□□□□ -1.71
USP38Q8NB14 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 MAPK10-372ENST00000641954 3413 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.38□□□□□ -1.71
USP38Q8NB14 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 SNORD35B-201ENST00000363660 87 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 Y_RNA.493-201ENST00000384422 102 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 AL355379.1-201ENST00000405542 640 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 SNORA3.3-201ENST00000408712 125 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.38□□□□□ -1.71
USP38Q8NB14 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
USP38Q8NB14 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.38□□□□□ -1.71
USP38Q8NB14 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.38□□□□□ -1.71
USP38Q8NB14 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC093698.1-201ENST00000423843 571 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC005517.2-201ENST00000424673 553 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 HSPD1P21-201ENST00000436541 245 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.38□□□□□ -1.71
USP38Q8NB14 RPL29P29-201ENST00000448725 423 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC097493.1-201ENST00000463958 372 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC012170.1-201ENST00000495139 359 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC114981.1-201ENST00000503897 678 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 HSPE1P23-201ENST00000509838 286 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC104619.4-201ENST00000510773 249 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.38□□□□□ -1.71
USP38Q8NB14 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC104986.1-201ENST00000517978 436 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 DEFB131D-201ENST00000526803 184 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.38□□□□□ -1.71
USP38Q8NB14 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.38□□□□□ -1.71
USP38Q8NB14 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.38□□□□□ -1.71
USP38Q8NB14 CYCSP2-201ENST00000558168 301 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC087499.8-201ENST00000578406 226 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AL451044.1-201ENST00000604867 238 ntBASIC4.38□□□□□ -1.71
USP38Q8NB14 AC092354.2-201ENST00000607786 514 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms