Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC135001.1-201ENST00000544546 283 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 MIR7853-201ENST00000584820 132 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC090425.1-201ENST00000610007 140 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 AC244107.2-201ENST00000611773 76 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 Z69720.2-201ENST00000624755 279 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 EXOC5P1-201ENST00000510543 1969 ntBASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
UBE3DQ7Z6J8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC133552.1-201ENST00000569988 4007 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC092642.1-201ENST00000392417 425 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AL391417.1-201ENST00000404100 426 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 SNORA11.3-201ENST00000408471 128 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 RNU2-36P-201ENST00000410361 191 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 MCFD2P1-201ENST00000417812 300 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC114482.1-201ENST00000418010 247 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC005019.1-201ENST00000436455 431 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC127537.2-201ENST00000439258 465 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC005094.1-201ENST00000440420 368 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 MTCO3P10-201ENST00000455912 772 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC005008.1-201ENST00000456151 612 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 RN7SL51P-201ENST00000468230 285 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 RPL7P43-201ENST00000478876 753 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 RN7SL547P-201ENST00000490793 290 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 RN7SL101P-201ENST00000496350 279 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 HIGD1AP13-201ENST00000509878 289 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 HMGN1P28-201ENST00000521340 364 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC100870.1-201ENST00000522035 505 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 RN7SL356P-201ENST00000582228 248 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 SNORA11.6-201ENST00000619030 128 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 PLCE1P1-201ENST00000622094 305 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AL031119.1-201ENST00000404707 1879 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 ABCC13-202ENST00000463099 3842 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AL049641.1-201ENST00000441055 1948 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 API5P2-201ENST00000397055 1498 ntBASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
UBE3DQ7Z6J8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 Y_RNA.5-201ENST00000362334 102 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 SNORD3E-201ENST00000362899 217 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 Y_RNA.80-201ENST00000362996 102 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1284P-201ENST00000363701 100 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 Y_RNA.252-201ENST00000364556 101 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-702P-201ENST00000364982 107 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 SNORA24.1-201ENST00000384401 135 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 Y_RNA.576-201ENST00000384781 102 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 RNU6-1304P-201ENST00000411374 106 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 GPS2P1-201ENST00000411761 986 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 CHEK2P5-201ENST00000423877 246 ntBASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.12□□□□□ -1.59
UBE3DQ7Z6J8 RPL23AP89-201ENST00000439324 255 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms