Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ELOCP31-201ENST00000540463 467 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13CQ709C8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 MTAPP1-201ENST00000489154 819 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 AL353684.1-201ENST00000622677 1120 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 OR52B1P-201ENST00000316506 909 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13CQ709C8 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 RPL23AP58-201ENST00000440453 469 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 RPL21P71-201ENST00000465598 459 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 RPL23AP14-201ENST00000468281 468 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13CQ709C8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS13CQ709C8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13CQ709C8 AL109809.4-201ENST00000603520 2185 ntBASIC1.8□□□□□ -2.12
VPS13CQ709C8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS13CQ709C8 MTCO1P22-201ENST00000604619 1360 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13CQ709C8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC009238.1-201ENST00000442165 424 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC009237.6-201ENST00000446969 424 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC068781.1-201ENST00000488231 618 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 FRG1DP-201ENST00000635586 771 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC005840.1-201ENST00000498412 377 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 RN7SKP234-201ENST00000517173 224 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 SNORA4-201ENST00000584302 138 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 RMST_2.1-201ENST00000617263 136 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13CQ709C8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13CQ709C8 FGF7P8-201ENST00000402994 292 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 HSPE1P18-201ENST00000517602 280 ntBASIC1.79□□□□□ -2.12
VPS13CQ709C8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS13CQ709C8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
VPS13CQ709C8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 VWA8P1-201ENST00000510889 176 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 OR4R2P-201ENST00000530815 597 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 AC011978.2-201ENST00000569835 2054 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS13CQ709C8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
VPS13CQ709C8 AL354719.1-201ENST00000406535 843 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 AC069234.5-201ENST00000611056 416 ntBASIC1.78□□□□□ -2.12
VPS13CQ709C8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VPS13CQ709C8 RAC1P5-201ENST00000512182 576 ntBASIC1.78□□□□□ -2.13
VPS13CQ709C8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.13
VPS13CQ709C8 SNORA51.11-201ENST00000384442 131 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 LUZP4P1-201ENST00000415420 344 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 RPS15AP6-201ENST00000420703 385 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 AC123904.3-201ENST00000547218 814 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 AL390334.1-201ENST00000556395 450 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS13CQ709C8 AC008264.2-201ENST00000610193 3731 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 RNU6-457P-201ENST00000363999 107 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 RNA5SP190-201ENST00000365222 118 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 SNORA11.4-201ENST00000408823 129 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 AL390023.1-201ENST00000428836 262 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 RPS24P8-201ENST00000431490 402 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13CQ709C8 AL583832.1-201ENST00000603227 784 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 AC022960.2-201ENST00000616300 666 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS13CQ709C8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13CQ709C8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13CQ709C8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
VPS13CQ709C8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VPS13CQ709C8 RPL12P25-201ENST00000455592 494 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS13CQ709C8 CU459211.1-201ENST00000635667 749 ntBASIC1.77□□□□□ -2.13
VPS13CQ709C8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms