Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AL365503.1-201ENST00000605247 905 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AP002360.3-201ENST00000607673 710 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AC007014.2-201ENST00000615581 479 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AC009159.1-201ENST00000618386 642 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AC087385.3-201ENST00000620477 187 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AC009268.2-201ENST00000621925 457 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 NMD3P1-201ENST00000439704 1488 ntBASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.16□□□□□ -1.74
PTCHD4Q6ZW05 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTCHD4Q6ZW05 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.15□□□□□ -1.74
PTCHD4Q6ZW05 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PTCHD4Q6ZW05 NXPH1-205ENST00000602349 1953 ntBASIC4.15□□□□□ -1.74
PTCHD4Q6ZW05 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RNU1-15P-201ENST00000353977 144 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 Y_RNA.372-201ENST00000365599 102 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RNU1-63P-201ENST00000383902 164 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RNU4-34P-201ENST00000410431 124 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AL160275.2-201ENST00000412010 394 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC069213.2-201ENST00000420238 366 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AL353777.1-201ENST00000425552 326 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 PSMD10P3-201ENST00000437000 448 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC069285.2-201ENST00000440210 275 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 ISCUP1-201ENST00000454451 448 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC013267.1-201ENST00000458227 267 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 snoU13.8-201ENST00000458890 104 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RPL37P6-202ENST00000464216 403 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AL672167.3-201ENST00000465951 960 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RBM43P1-201ENST00000476891 1081 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RPL7AP6-201ENST00000477943 801 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 PTGES3P3-201ENST00000511479 482 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 ARL2BPP6-201ENST00000512757 439 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 RNA5SP154-201ENST00000516193 111 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 IGLV2-28-201ENST00000520681 304 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AP001880.2-201ENST00000538233 448 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC090615.1-201ENST00000577519 154 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC011487.3-201ENST00000593607 453 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC011468.4-201ENST00000603942 409 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AL596245.1-201ENST00000618994 362 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AL356321.1-201ENST00000621360 228 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 AC244258.1-201ENST00000637553 1071 ntBASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
PTCHD4Q6ZW05 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AC007685.1-201ENST00000329806 452 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 SNORA51.8-201ENST00000384234 132 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 MTCO3P40-201ENST00000392516 676 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 MTND4LP20-201ENST00000402379 270 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 Z98745.1-201ENST00000402553 494 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 LAP3P1-201ENST00000403648 294 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AL590002.1-201ENST00000406554 418 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 RNU2-15P-201ENST00000410692 191 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 RNU4-55P-201ENST00000410731 137 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AC127526.1-201ENST00000417526 366 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 PIGFP2-201ENST00000421400 651 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AC069157.1-201ENST00000421749 137 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 RPL31P35-201ENST00000431058 377 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AC122718.1-201ENST00000439448 744 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 MTATP6P30-201ENST00000443540 664 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AP1S2P1-201ENST00000457344 379 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 HMGB3P30-201ENST00000457863 606 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AC010469.1-201ENST00000463864 576 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 AP000873.1-201ENST00000463987 400 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 FAM133DP-201ENST00000464802 691 ntBASIC4.14□□□□□ -1.75
PTCHD4Q6ZW05 RPS3AP14-201ENST00000483907 780 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms