Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-720P-201ENST00000516363 108 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 SNORA31.20-201ENST00000517111 133 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MED28P5-201ENST00000528254 438 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC008033.2-201ENST00000542626 177 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 OR4T1P-201ENST00000554933 911 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC245505.1-201ENST00000556398 224 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MIR3913-1-201ENST00000577744 102 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MIR3146-201ENST00000580367 79 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MIR3118-1-201ENST00000581787 76 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 KC877982.1-201ENST00000602313 470 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AP001429.1-201ENST00000602568 530 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC073648.5-201ENST00000603502 305 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC098614.4-201ENST00000607601 462 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 FAM27B-201ENST00000610601 213 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC005332.10-201ENST00000612725 619 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AL138721.1-201ENST00000616756 179 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MIR6130-201ENST00000619419 109 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 MTND5P29-201ENST00000458676 1807 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 FAM35DP-201ENST00000323387 2712 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 Y_RNA.582-201ENST00000391023 95 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 RNU6-754P-201ENST00000391166 107 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 RNA5SP306-201ENST00000411087 107 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 BX510359.3-201ENST00000422168 306 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 RPL21P91-201ENST00000429231 479 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC092473.1-201ENST00000441098 221 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 CEACAMP7-201ENST00000444105 496 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 HMGB3P22-202ENST00000451823 572 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC007967.1-201ENST00000455422 1159 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC079804.1-201ENST00000461922 436 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC138853.1-201ENST00000503549 823 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 BNIP3P41-201ENST00000503774 571 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 SCARNA22-201ENST00000503991 125 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 MTCYBP41-201ENST00000528913 1123 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AP006289.1-201ENST00000538089 277 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AL133271.1-201ENST00000538229 291 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC020914.4-201ENST00000597690 277 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC025946.2-201ENST00000603398 234 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC080078.2-201ENST00000603766 501 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 HMGB1P50-201ENST00000605814 607 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC007038.2-201ENST00000608095 740 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AL391813.2-201ENST00000609113 322 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC108747.1-201ENST00000609508 535 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AC091953.2-201ENST00000623979 160 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 AL157700.1-201ENST00000561973 1432 ntBASIC4.35□□□□□ -1.71
RNF220Q5VTB9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF220Q5VTB9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF220Q5VTB9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 RNU2-43P-201ENST00000410306 190 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 RN7SKP177-201ENST00000410567 355 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 RN7SKP33-201ENST00000410942 340 ntBASIC4.34□□□□□ -1.71
RNF220Q5VTB9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms