Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 LINC00888-204ENST00000487386 421 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 RPS27AP18-201ENST00000515536 459 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 NDUFA5P6-201ENST00000542110 379 ntBASIC3.07□□□□□ -1.92
NUP188Q5SRE5 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.07□□□□□ -1.92
NUP188Q5SRE5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.06□□□□□ -1.92
NUP188Q5SRE5 RNU1-91P-201ENST00000364746 163 ntBASIC3.06□□□□□ -1.92
NUP188Q5SRE5 RNA5SP88-201ENST00000365560 109 ntBASIC3.06□□□□□ -1.92
NUP188Q5SRE5 AIMP1P1-201ENST00000418670 937 ntBASIC3.06□□□□□ -1.92
NUP188Q5SRE5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.06□□□□□ -1.92
NUP188Q5SRE5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.06□□□□□ -1.92
NUP188Q5SRE5 OR4H12P-201ENST00000556269 907 ntBASIC3.06□□□□□ -1.92
NUP188Q5SRE5 AC026464.5-201ENST00000562497 722 ntBASIC3.06□□□□□ -1.92
NUP188Q5SRE5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.06□□□□□ -1.92
NUP188Q5SRE5 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
NUP188Q5SRE5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
NUP188Q5SRE5 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
NUP188Q5SRE5 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 RN7SKP140-201ENST00000411196 284 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC091917.2-201ENST00000505002 744 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 RNU6-295P-201ENST00000516901 104 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 VTA1P2-201ENST00000520205 911 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AK6P1-201ENST00000540219 478 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC123904.3-201ENST00000547218 814 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC135628.1-201ENST00000568867 534 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC061975.8-201ENST00000587058 721 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 LRRC77P-213ENST00000637727 880 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AL359893.1-201ENST00000447628 1580 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AL606537.1-201ENST00000607258 2011 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 CUL1P1-201ENST00000509510 2425 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 Y_RNA.540-201ENST00000384638 111 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC093151.1-201ENST00000427711 313 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC104389.3-201ENST00000445629 235 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 ELOCP31-201ENST00000540463 467 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC011494.1-201ENST00000596454 237 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 AC023813.4-201ENST00000607580 580 ntBASIC3.05□□□□□ -1.92
NUP188Q5SRE5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 ZNF355P-201ENST00000427301 3216 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 SNORA62.2-201ENST00000364672 152 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 ATG3P1-201ENST00000419507 911 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 AC011753.1-201ENST00000451001 220 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 NDUFB4P9-201ENST00000511646 388 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 AC112673.1-201ENST00000513168 575 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 TRAV11-201ENST00000539512 339 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NUP188Q5SRE5 AL359715.4-201ENST00000606629 1436 ntBASIC3.04□□□□□ -1.92
NUP188Q5SRE5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP188Q5SRE5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUP188Q5SRE5 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP188Q5SRE5 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.03□□□□□ -1.92
NUP188Q5SRE5 MIR518E-201ENST00000385252 88 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 AL023284.1-201ENST00000403956 276 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 AL158825.1-201ENST00000414735 521 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 AL513175.2-201ENST00000422071 443 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 COX6CP2-201ENST00000444980 225 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 RPL36AP33-201ENST00000450395 310 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 RPL23AP62-201ENST00000463396 453 ntBASIC3.03□□□□□ -1.92
NUP188Q5SRE5 XIAPP3-201ENST00000312918 795 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 SNORD88.1-201ENST00000408684 91 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC011816.1-201ENST00000441346 546 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC008126.1-201ENST00000549019 480 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AP002967.1-201ENST00000624203 539 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 MIR1291-201ENST00000627649 87 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 MTND5P27-201ENST00000428871 1720 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 Y_RNA.116-201ENST00000363292 103 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms