Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGXB3Q12766 MIR142-201ENST00000384835 87 ntBASIC3.86□□□□□ -1.79
HMGXB3Q12766 RPL7P54-201ENST00000438336 674 ntBASIC3.86□□□□□ -1.79
HMGXB3Q12766 MTCYBP14-201ENST00000457471 715 ntBASIC3.86□□□□□ -1.79
HMGXB3Q12766 TRAV11-201ENST00000539512 339 ntBASIC3.86□□□□□ -1.79
HMGXB3Q12766 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGXB3Q12766 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGXB3Q12766 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGXB3Q12766 AC007342.7-201ENST00000624610 2337 ntBASIC3.86□□□□□ -1.79
HMGXB3Q12766 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGXB3Q12766 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HMGXB3Q12766 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HMGXB3Q12766 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HMGXB3Q12766 AL009174.1-201ENST00000426577 416 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 RPS24P8-201ENST00000431490 402 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 AL445646.1-201ENST00000431784 216 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 RPL23AP14-201ENST00000468281 468 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 AC072039.1-201ENST00000477611 581 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGXB3Q12766 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGXB3Q12766 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HMGXB3Q12766 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 AC004866.2-201ENST00000438285 481 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 RPL38P4-201ENST00000502376 214 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.85□□□□□ -1.79
HMGXB3Q12766 AC009570.1-201ENST00000609599 745 ntBASIC3.85□□□□□ -1.79
HMGXB3Q12766 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HMGXB3Q12766 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HMGXB3Q12766 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HMGXB3Q12766 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.84□□□□□ -1.8
HMGXB3Q12766 SPA17P1-201ENST00000416656 452 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HMGXB3Q12766 AL353729.1-201ENST00000425044 720 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 AC124916.1-201ENST00000444020 547 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 AC087385.1-201ENST00000475062 312 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.8
HMGXB3Q12766 CCNHP1-201ENST00000513311 678 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 RNA5SP380-201ENST00000517190 98 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.84□□□□□ -1.8
HMGXB3Q12766 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.84□□□□□ -1.8
HMGXB3Q12766 MIR6132-201ENST00000622083 109 ntBASIC3.84□□□□□ -1.8
HMGXB3Q12766 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HMGXB3Q12766 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGXB3Q12766 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGXB3Q12766 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.83□□□□□ -1.8
HMGXB3Q12766 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.83□□□□□ -1.8
HMGXB3Q12766 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGXB3Q12766 BMS1P7-201ENST00000602440 1052 ntBASIC3.83□□□□□ -1.8
HMGXB3Q12766 AL359198.2-201ENST00000611836 194 ntBASIC3.83□□□□□ -1.8
HMGXB3Q12766 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.83□□□□□ -1.8
HMGXB3Q12766 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGXB3Q12766 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.82□□□□□ -1.8
HMGXB3Q12766 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGXB3Q12766 RPS26P30-201ENST00000443431 335 ntBASIC3.82□□□□□ -1.8
HMGXB3Q12766 AL035551.1-201ENST00000446931 348 ntBASIC3.82□□□□□ -1.8
HMGXB3Q12766 AC004263.1-201ENST00000479327 332 ntBASIC3.82□□□□□ -1.8
HMGXB3Q12766 AL160394.1-201ENST00000624765 724 ntBASIC3.82□□□□□ -1.8
HMGXB3Q12766 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.82□□□□□ -1.8
HMGXB3Q12766 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
HMGXB3Q12766 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HMGXB3Q12766 SNORA48.3-201ENST00000391081 134 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGXB3Q12766 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGXB3Q12766 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HMGXB3Q12766 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGXB3Q12766 AP000893.1-201ENST00000474462 794 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGXB3Q12766 RNA5SP76-201ENST00000516277 87 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGXB3Q12766 PDCL2P2-201ENST00000533651 189 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 OR4K7P-201ENST00000580232 945 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 AP004372.1-201ENST00000604842 844 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 AL451074.6-201ENST00000608512 729 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGXB3Q12766 PHKBP1-201ENST00000450951 1951 ntBASIC3.81□□□□□ -1.8
HMGXB3Q12766 SNORD88.1-201ENST00000408684 91 ntBASIC3.8□□□□□ -1.8
HMGXB3Q12766 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGXB3Q12766 NDUFB4P6-201ENST00000436819 366 ntBASIC3.8□□□□□ -1.8
HMGXB3Q12766 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGXB3Q12766 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGXB3Q12766 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGXB3Q12766 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGXB3Q12766 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 Y_RNA.269-201ENST00000364685 89 ntBASIC3.8□□□□□ -1.8
HMGXB3Q12766 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGXB3Q12766 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGXB3Q12766 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms